| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1189 |
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| Symbol | |
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| ID | 3706763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1296443 |
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| End bp | 1298167 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737692 |
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| Product | RecJ exonuclease |
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| Protein accession | YP_343221 |
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| Protein GI | 77164696 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAGA AAGTTCTCAA ACAGCGGCCT GTTAACGAGC TTGAATGGCC AGAGGCAATC
CATCCGATAT TACGCCGGGT GTATGGCGCG CGAGGGATCA AGGCTCCAGA TGAGCTCGAC
TATACCCTGG AGCGTTTACC TTCTCCATGG TTGCTGAGCA ATATCAAAAT GGCAGTGACC
TTATTAATGG AAGCCCTCGT ACGGGATTGG CGGATTCTGG TGGTCGCTGA TTTTGATGCG
GATGGCGCCA CTAGCTGCGC GGTGGCTGTG CGGGCGCTTC GCTTAATGGG TGCCCATAAA
GTAGATTATT TGGTCCCCAA CCGTTTTATC CACGGCTACG GCCTTACCCC CGCCATTGTG
GCGGAGGCGA TGGCCCGGGG CCAGCCGGAT CTCATTATTA CCGTGGACAA TGGGATATCC
AGTCTGGCCG GCGTACAAGC GGCGCGAGCG GCCAATATTC GTGTGCTTAT CACGGATCAC
CACTTGCCAG GAATATCCTT GCCAGCCGCG AATGCTATTG TCAACCCTAA CCTTCCCAAT
GATCCTTTTC CCAGCACTTG CCTCGCAGGG GTGGGTGTTA TTTTTTATGT CATGCTAGCT
TTACGGGCCC ACCTAAGGGA GCAAGGCTGG TTTATTCGCA GAGATGAGCA GGAACCAGCG
CTTGCTCCCC TGCTGGACTT GGTTGCGCTT GGCACGGTCG CTGATGTGGT GCCGCTGGAT
CAGATTAATC GGATCTTGGT TGCCCAAGGA CTGGCCCGCA TTCGGCAGAG CCGCTGCTGC
GCTGGTATTC AGGCACTCGT GGCTTGCGCT CGACGCCCTC TTGAAACCTT GACCACCAGT
GATCTGGGTT TTGCGGTAGG GCCACGGCTA AATGCCGCAG GGCGCTTGGA GGATATGAGC
CTTGGTATTG CTTGTTTATT AACCGATTCC CTGGAGCTGG CGCAACAACA GGCTAATCAG
CTTGATGGGC TCAATCGTGA GCGGCGAGAG ATTGAGTCGA CTATGCAAGA GCAAGCAGTA
ACTCATCTGG AAAATTTGGT TTTTCAAGGA GAAGAGAGGG CGCCACTAGG CTATTGTTTA
TTTGATGAAT CGTGGCATCA AGGCGTAATC GGCCTGCTCG CTGCTCGCAT TCGGGAGCGG
GTCTATCGTC CAGTAATTGC TTTTGCTCCC CATGATAGTG AGGAGTTGAA GGGATCGGCC
CGTTCCATTC CAGGGCTTCA CATTCGTGAT GCTTTGGATA GAGTAGCAAC TTGCTATCCC
GATTTGCTGA CTAAATTTGG TGGTCATGCG ATGGCTGCCG GTTTAAGTTT GCGGCGGGGC
CATCTAGAGC CCTTCCGCGT TGCTTTTTTG GAGGTACTAG AAACTCTGCT TGATAAGGAA
GCCTTGGAGG ATGTTATTCT CAGCGATGGC AGCTTAGAAC AGTGGGATCT AGAAATGGCG
GAAACCTTGC GGAACGGTGG TCCTTGGGGG CAGGGATTTC CGGAGCCCTT GTTTGATGGG
GTATTTCGGG TAGCAGGGTT TCGTATTGTG GGCGAAGCGC ACCTTAAGCT GACGCTGACG
ACCCTGGATG GTCGACAGCA ACTGGAAGGA ATTGCCTTTC GCTGCCTCCC ACCCGACGGG
TTTGCGCTTG GCATAAAAAT AAGGCTTGCT TATCGGTTGG ATGTCAATAT ATATCGAGGT
TCGCGGACAG CGCAATTGAT GGTGGAGCAC TTAGAGTTGA TTTAA
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| Protein sequence | MAEKVLKQRP VNELEWPEAI HPILRRVYGA RGIKAPDELD YTLERLPSPW LLSNIKMAVT
LLMEALVRDW RILVVADFDA DGATSCAVAV RALRLMGAHK VDYLVPNRFI HGYGLTPAIV
AEAMARGQPD LIITVDNGIS SLAGVQAARA ANIRVLITDH HLPGISLPAA NAIVNPNLPN
DPFPSTCLAG VGVIFYVMLA LRAHLREQGW FIRRDEQEPA LAPLLDLVAL GTVADVVPLD
QINRILVAQG LARIRQSRCC AGIQALVACA RRPLETLTTS DLGFAVGPRL NAAGRLEDMS
LGIACLLTDS LELAQQQANQ LDGLNRERRE IESTMQEQAV THLENLVFQG EERAPLGYCL
FDESWHQGVI GLLAARIRER VYRPVIAFAP HDSEELKGSA RSIPGLHIRD ALDRVATCYP
DLLTKFGGHA MAAGLSLRRG HLEPFRVAFL EVLETLLDKE ALEDVILSDG SLEQWDLEMA
ETLRNGGPWG QGFPEPLFDG VFRVAGFRIV GEAHLKLTLT TLDGRQQLEG IAFRCLPPDG
FALGIKIRLA YRLDVNIYRG SRTAQLMVEH LELI
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