Gene Noc_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1187 
Symbol 
ID3706761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1294620 
End bp1295318 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID637737690 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_343219 
Protein GI77164694 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTACTC AGCAACTTCC TCTGCCCATT GGGGATTCCG GTGCTCCCAG TTTTGAGAAT 
TATTATCTCG CTGCGGCCAA CCGCGAGTCT GTTGCAGCGG TAGAACGCTG CGGGCAAGGA
AAAGGAGATC GTTTTCTTTG CCTCCGAGGA CCTTCGGGGG TAGGAAAAAC TCACTTATTG
CTTGCTGCTT GTCAGATCGC GGCCCAAAAG GGTGAGCGGG TTGCTTATGT TCCCTTGAAA
CGGGCCGTTA TCATGGCGCC CGAAATTCTG GGGGGATTGG AGGTTGCCGC CTTCGTTGCC
ATTGATGATA TCGATCATAT TGCCGGTTAC CGTCATTGGG AAGAGTCCTT GCTTCACCTT
TATAATCTCC TGCAGGAGGG GCGAGGCCGG CTCCTGCTGG CTTCCACCGA TAAACCTAGT
ACGCTCCATT GGCTTTTGCC CGATCTCCGC TCCCGCTTAG GATGGGGGCT GGGTTATCAG
CTCCAGCCCT TGGACGATCA TCAAAAGCAT GCCGCGTTAC AATTCCAGGC CGCGAAAAGA
GGCTTGGAGT TGCCAGATGA GGTAGCAGGT TTTTTATTAC GCCATAGCGA GCGGGATATG
CACTCTTTGA GCAGTATACT GGCACAGTTA GAGCGTGCCT CCATGGCGGC TCAGAGGCGG
CTGACTGTTC CTTTTGTACG GCAAGTTTTA GACATATAA
 
Protein sequence
MVTQQLPLPI GDSGAPSFEN YYLAAANRES VAAVERCGQG KGDRFLCLRG PSGVGKTHLL 
LAACQIAAQK GERVAYVPLK RAVIMAPEIL GGLEVAAFVA IDDIDHIAGY RHWEESLLHL
YNLLQEGRGR LLLASTDKPS TLHWLLPDLR SRLGWGLGYQ LQPLDDHQKH AALQFQAAKR
GLELPDEVAG FLLRHSERDM HSLSSILAQL ERASMAAQRR LTVPFVRQVL DI