Gene Noc_1180 details

Gene Information

• Locus tag: Noc_1180
• Symbol: dcd
• ID: 3706754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 1288562
• End bp: 1289128
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637737683
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_343212
• Protein GI: 77164687
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.150016
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTA AATCCGATAA GTGGATTCGT TACATGGCGC AAGCACACGG CATAATAGAG 
CCCTTCGAGC CGCGTCAGAT CCGGGAAGCC AATAATGCCC GCATTATTTC TTATGGCACT 
TCAAGTTATG GCTATGATAT TCGGTGTTCT AATGAGTTTA AGATTTTTAC CAATATCAAC 
TCGGCTGTTG TAGATCCTAA GAATTTTGAC GCTAGCAGTT TTGTGGATGT GCAGTCCGAT 
GTTTGCATTA TTCCCCCTAA TTCTTTTGCA TTAGCGCGAA CAGTTGAATA TTTTCGCATT 
CCCCGTAGCG TGCTTACCAT TTGCTTGGGG AAATCGACTT ATGCCCGTTG CGGGATCATT 
GTTAACATTA CCCCTTTGGA ACCAGAGTGG GAAGGGCACG TGACCTTGGA ATTTTCCAAT 
ACAACTCCTC TACCAGCTAA AGTTTACGCT AACGAAGGAG TCGCTCAGGT GGTATTTTTC 
GAGTCGGATG AGCTTTGCGA GACCTCATAT CGGGATCGTA GCGGCAAATA CCAGGGCCAA 
ACTGGCGTTA CGCTTCCAAA GGCTTAA 

 

Protein sequence

MSIKSDKWIR YMAQAHGIIE PFEPRQIREA NNARIISYGT SSYGYDIRCS NEFKIFTNIN 
SAVVDPKNFD ASSFVDVQSD VCIIPPNSFA LARTVEYFRI PRSVLTICLG KSTYARCGII 
VNITPLEPEW EGHVTLEFSN TTPLPAKVYA NEGVAQVVFF ESDELCETSY RDRSGKYQGQ 
TGVTLPKA