Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1173 |
Symbol | |
ID | 3706825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1281996 |
End bp | 1283543 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637737677 |
Product | electron transport complex protein RnfC |
Protein accession | YP_343206 |
Protein GI | 77164681 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTC GCCGGCTATG GTCATTCTCC GGTGGCCTGA AACTTCCTGG CCATAAAAAC CCCTCCACGC CAATGCCCAT CGTTCAGGCC GCCCTGCCAA AACGACTGGT ACTGCCTCTG CAACAGCACA TTGGTGAAGC GGCGGAACCT ATGGTTAGCA TTGGTGATCA GGTACTGAAG GGTCAAGTGA TCGCCACGGC TCAAGGCTAT CTCAGCGCCC CGGTACATGC TTCCAGCTCC GGCCAAGTAG TAGCGTTAGA GAACCGGCCA ATTCCCCATC CTTCCGGTCT CAGCGCTCCT TGCATTGTCA TCGAAACCGA TGGCAAGGAC GCCTGGGGCG AACGCCATCC GGTGGAAAAC TATCGACAGA TTGATCCTAG CCATCTACGT AACCTGATTC GCCAGGCGGG GATCGTGGGA CTGGGGGGGG CTGGTTTTCC CACCTTTATC AAGCTCAATC CCGGTCCCCA ACCCAAGGTC AAGACATTAA TTCTCAACGG CGCCGAGTGT GAGCCTTATA TCACCTGCGA TGAAGCGCTT ATGCGGGAGC GGGCCGAGGA GATTATCCAG GGGGCCGCCA TCATGGCTCA TGCCCTCAAT GCCTACCATT GCCTGATTGG CATTGAGGAC GATAAACCTG AAGCCTGTAC AGTTCTTGCT GCCGCTGCGG CCGAGGGGAT CGAGGTGGTG CCGATTCCAA CCCGCTACCC CGCCGGAGGC GAGAAACAGC TCATTAAGGT TTTGACTGGG CAGGAAGTCC CCAGCAATGG CCTGCCTATT GATATCGGCG TCGTTTGCCA CAACGTAGGC ACCGCGGCGG CTGTTTACCG GGCTATTCAC CGGGGTGAAC CCCTTCTCTC CCGGATCATG ACCGTGGCCG GCAAGGCTGT GGCCCACCCC GGTAATTTAG AAGTTTTGCT GGGCACGCCC ATTCGCCATC TATTAGCGCA ACAAGGTGCG AATATTCAAA GCATTGACCG CCTCATCATG GGCGGCCCCA TGATGGGTTT TACTCTCCAC GATGACGGGG CGCCAGTTAT CAAAACTACC AACTGCCTAT TAGCGGGGCT CCATGAAGAC ACCCGGCAAC CCCCGGCCAT GCCTTGTATT CGCTGCGGTG CTTGCGTGGA AGCCTGTCCT GTAGGACTGC TTCCCCAACA ACTCTATTGG CATGCCCGAG CCAAAGAGTT AGATAAAACC CAAGACTATC ACCTTTTTGA TTGCATTGAA TGCGGTTGCT GCGCCTACGT CTGTCCTAGC CACATTCCCT TGGTCCAGTA TTACCGTTAT GCTAAAAGCG AGATCTGGAC CCAGGAACAA GAGCGAGAAA AGGCCGACCT GGCCCGCCAG CGCCATGAAT TCCGGCAGCA ACGGCTAGCA CGGGAGCAGC AACAAAAAGC GGCCCGGCAA CGAGCCAGAA AGGCCCCTGT CACTCCCTCG GCCAGCAAGG CGGAGAAGCA GGCTGCCATT CAAGCGGCGG TAGAGCGATC CCAGGCTAAA CGCGCCGCCC AAAAAACGGC GGAAGACGAA CCCTTTTCTT CACCATAG
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Protein sequence | MKTRRLWSFS GGLKLPGHKN PSTPMPIVQA ALPKRLVLPL QQHIGEAAEP MVSIGDQVLK GQVIATAQGY LSAPVHASSS GQVVALENRP IPHPSGLSAP CIVIETDGKD AWGERHPVEN YRQIDPSHLR NLIRQAGIVG LGGAGFPTFI KLNPGPQPKV KTLILNGAEC EPYITCDEAL MRERAEEIIQ GAAIMAHALN AYHCLIGIED DKPEACTVLA AAAAEGIEVV PIPTRYPAGG EKQLIKVLTG QEVPSNGLPI DIGVVCHNVG TAAAVYRAIH RGEPLLSRIM TVAGKAVAHP GNLEVLLGTP IRHLLAQQGA NIQSIDRLIM GGPMMGFTLH DDGAPVIKTT NCLLAGLHED TRQPPAMPCI RCGACVEACP VGLLPQQLYW HARAKELDKT QDYHLFDCIE CGCCAYVCPS HIPLVQYYRY AKSEIWTQEQ EREKADLARQ RHEFRQQRLA REQQQKAARQ RARKAPVTPS ASKAEKQAAI QAAVERSQAK RAAQKTAEDE PFSSP
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