| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1172 |
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| Symbol | |
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| ID | 3706824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1280924 |
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| End bp | 1281961 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637737676 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_343205 |
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| Protein GI | 77164680 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTTT CGCTCTTTAG CTCGCCCCAT CTCCACCAGA AAAACGGCGT CTCTCAGCTT
ATGTTCCAGG TCATTCTGGC CTTGCTGCCA GGCATCGCCG CCTATAGCTG GTATTTTGGT
TACGGCGTAC TCATCAACAT TGCCCTTGCC GTCACTACCG CTTTGGCTAG CGAGGCCCTC
ATGTTGAGAG CCCGAGGGCA ACCTCTCGGC CTTTTTTTGA CCGATGGCAG CGCGGTAGTG
ACCGCTGTAC TGCTAGCCCT CTGCCTCCCC CCCCTTGCGC CCTGGTGGGT ACCTGTTATT
GGCGCTGCTT TCGCTCTTAT TTTCGCCAAG CATCTTTATG GAGGATTAGG CTATAATCCC
TTCAATCCCG CCATGGTGGG CTACGTGCTG CTGCTGATCT CCTTTCCCAA GGAAATGACT
GCCTGGTTAC CAGCGCGGGA GTTAGCAACT CACACGGTGG GATTACAGGA AAGCCTGGAA
TTAGTCTTTA CTGGCGCCAC CGCCGTCCAA GGAATGACAA TTGACGCCCT CTCCGGGGCC
ACGCCCCTAG ATTATGCCAA AACTCAGCTG GGGCTCGGCC AACCCATGGC GGAAATCCGT
GTCCAGCCCT TGTTTGGCAT CGTAGGAGGC CAGGGCTGGG AGTGGATCAA CGCCGGCTTT
CTCCTCGGGG GGCTTTGGCT TCTCTATAAG CGGGTGATCA GCTGGCATAT TCCCCTTGCC
ATGCTAGGCA GCCTGCTAAT CTTGGCCCTC TGCTTCCAAT GGCTGAATCC TGCCGGCTAT
CCCTCTGCTC TCTTTCACCT GGTTAGCGGC GGCGTTTTGC TAGGCGCCTT TTTTATCGCT
ACGGATCCAG TCACCGCCGC CGCTACTCCC AGGGGCCGTT TGTTTTACGG AGCGGGAGTC
GGCTGTCTGA CCTATATCAT TCGCACCTGG GGCGGTTACC CGGATGGCGT CGCCTTTGCG
GTGCTGCTCA TGAATATGAC CGTTCCCCTT ATTGATTATT ACACCCCGCC CCGGGTCTTT
GGCCATAACC GTCATTAA
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| Protein sequence | MQFSLFSSPH LHQKNGVSQL MFQVILALLP GIAAYSWYFG YGVLINIALA VTTALASEAL
MLRARGQPLG LFLTDGSAVV TAVLLALCLP PLAPWWVPVI GAAFALIFAK HLYGGLGYNP
FNPAMVGYVL LLISFPKEMT AWLPARELAT HTVGLQESLE LVFTGATAVQ GMTIDALSGA
TPLDYAKTQL GLGQPMAEIR VQPLFGIVGG QGWEWINAGF LLGGLWLLYK RVISWHIPLA
MLGSLLILAL CFQWLNPAGY PSALFHLVSG GVLLGAFFIA TDPVTAAATP RGRLFYGAGV
GCLTYIIRTW GGYPDGVAFA VLLMNMTVPL IDYYTPPRVF GHNRH
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