Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1169 |
Symbol | |
ID | 3706821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1278893 |
End bp | 1279603 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737673 |
Product | endonuclease III/Nth |
Protein accession | YP_343202 |
Protein GI | 77164677 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTGCC CGAGCGCATT TAAAAATGCC CGCCCCAGCA TGAAAAAAAA CGCAGAAATC CAGGAAATAT TCTCCCGCTT TCAGGCGGCC AATCCCAAAC CTACTACGGA GTTGAAGCAC CAAACTCCCT TTGAACTCCT TATTGCGGTC ATCTTGTCCG CCCAAGCCAC CGATAAAGGG GTCAATAAGG CCACCGCTCA GCTTTTTCCA GTAGCTAATA CTCCCCAAGC GATTCTGGAT CTGGGAGAAG AAGGCTTAAA GCATTACATT AAAACTATTG GCCTGTTTAA CAGCAAAGCC AAAAATATTC TCCAAACGTG TCGTCTTTTA CTCGAACAGC ATGGTGGCCA AGTGCCTAGT GATCGGGTTG CCTTAGAAGC CCTAGCCGGA GTGGGACGAA AAACCGCGAA TGTCATGCTT AACACCGCTT TTGGCCAACC CACCATTGCC GTGGACACCC ACATTTTCCG GGTGGCTAAC CGCATCGGCC TGGCCTCCGG TAAAACACCG CGCCAAGTGG AGGATACCCT AACCCGCGTG GTCCCCGATG AATTTCTGCA CGACGCCCAT CACTGGCTCA TTCTCCATGG CCGCTACGTA TGCACCGCCC GCAATCCCCG CTGCCAGGAA TGTTTGATCA ACGATTTGTG TGACTATTAT TCAAAGATAG CAAAGGAAAA ATCCCGTGGA TTAAAAAAAA CAGCGAGCTA A
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Protein sequence | MSCPSAFKNA RPSMKKNAEI QEIFSRFQAA NPKPTTELKH QTPFELLIAV ILSAQATDKG VNKATAQLFP VANTPQAILD LGEEGLKHYI KTIGLFNSKA KNILQTCRLL LEQHGGQVPS DRVALEALAG VGRKTANVML NTAFGQPTIA VDTHIFRVAN RIGLASGKTP RQVEDTLTRV VPDEFLHDAH HWLILHGRYV CTARNPRCQE CLINDLCDYY SKIAKEKSRG LKKTAS
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