Gene Noc_1166 details

Gene Information

• Locus tag: Noc_1166
• ID: 3706818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 1276477
• End bp: 1277049
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637737670
• Product: cytidine/deoxycytidylate deaminase, zinc-binding region
• Protein accession: YP_343199
• Protein GI: 77164674
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTGA GTGTCGCCAG TTTTGGCCTG GTGGGTCTGG GAGTCATTAG CTTGGCGGGG 
GAGGGCCGGG CAACGGAAAT AGAGAAGCCT TTCAATAGGG AAAGGGCGAC CCAATGGATG 
CGGCGCGCGA TTGAACTGAG CAGAAAAGCC ATGGAACTGG GCGATGGTTT TCCCTTTGGC 
TCGGTGATCG CCAAGGAGGG GGAAATCGTT GGTGAAGGGT GGAATCGATC CTGGGTCAAC 
AGGGACCCGT CCGCCCATGC AGAAATCGAA GCGATCCGTG ATGCCTGCAA GCGACTGGAT 
ACACTAAGCC TAGAGGGTTG CGATGTCTAC GCCAGCGCCC AGCCGTGCCC CATGTGTATT 
GCCGCCATCT ACTGGGCGGG CGCGGATCGG ATATTCTTTG GTAACAACGA CCGAGACATT 
GCCGCCCTCG ATCCAAATCT CGATGCCACC TTCATCTATC AGGCTTTGAC TAAGCCAGCA 
GAACGACGTC CGGTGACGGA ACGGGAGTTA TTACGTGAGG AAGCGATGGA GGTCTTTCGT 
GATTATGCCG CCATTAAAAA ACAGTCCACC TAG 

 

Protein sequence

MTVSVASFGL VGLGVISLAG EGRATEIEKP FNRERATQWM RRAIELSRKA MELGDGFPFG 
SVIAKEGEIV GEGWNRSWVN RDPSAHAEIE AIRDACKRLD TLSLEGCDVY ASAQPCPMCI 
AAIYWAGADR IFFGNNDRDI AALDPNLDAT FIYQALTKPA ERRPVTEREL LREEAMEVFR 
DYAAIKKQST