Gene Noc_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1161 
Symbol 
ID3706813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1268512 
End bp1269219 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content45% 
IMG OID637737666 
Producthypothetical protein 
Protein accessionYP_343195 
Protein GI77164670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCG AAGTCTATTG CGATGAAACC ATGCCTGATC TGTTCACTTC CTCGAAACGT 
CGTGGTCGCT ACCTCATGAT CGGTAGTATC TGGATTCCTG CTAAATTGCG AAATGAAGTG 
AAAGAAAAAA TCTGGGTATT GCGGAAGACT CATAACACCT GGGGAGAGAT TAAATGGACA 
AAGGTCTCAT CTGCGCGGTT ACCATTTTAT TTTGATGTAA TTGACCTGTT CGAAAGTTAT 
GGCATGGACC TGCGTTTTCG CTGCATTGCC GTTGATAGCG AGCAGGTTGA TATGCACTGG 
CATGATAATG ATGAGGAGCT TGGTTTTTAC AAGTTCTATT ACCAAATGCT GCATCATTGG 
ATTCTAGACT TCAATGAATA CCGGATATTT TGTGATACTA AAACTAATCG TGACCCGGCT 
CGCCTTGCAA TGCTTAAACG TTGTTTGGAT GCTGCAAACA TCTCTTCGCG GATCTCTTCG 
ATTCAGGCAT TGCCATCGCG GCATCTTGTT CTCATGCAGA TGTGCGATTT GTTGTTAGGT 
GCCGCAAGCA GTCGCATGAA CAAGACATTG AAGCCGTCCA GCGCTAAAGA AGCTGTCGTG 
AAACGTCTGG AAAGTCACTT GGATTTGGAT GCTGAACAGA TTTGCCCCAC CTATCGTAGT 
GCAAGGAAAT TCAATGTATT TCAGATTCGA CTCCAGGGGG GGTGGTAA
 
Protein sequence
MQFEVYCDET MPDLFTSSKR RGRYLMIGSI WIPAKLRNEV KEKIWVLRKT HNTWGEIKWT 
KVSSARLPFY FDVIDLFESY GMDLRFRCIA VDSEQVDMHW HDNDEELGFY KFYYQMLHHW 
ILDFNEYRIF CDTKTNRDPA RLAMLKRCLD AANISSRISS IQALPSRHLV LMQMCDLLLG 
AASSRMNKTL KPSSAKEAVV KRLESHLDLD AEQICPTYRS ARKFNVFQIR LQGGW