Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1146 |
Symbol | ihfA |
ID | 3706910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1254925 |
End bp | 1255224 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637737649 |
Product | integration host factor subunit alpha |
Protein accession | YP_343180 |
Protein GI | 77164655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0580836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTAA CCAAGGCCGA TATGACTGAA ACCCTTTACC AGGAGCTTGG TCTTAACAAG CGGGAGGCCA AGGAGATTGT AGAAATGTTT TTTGAAGATA TTCGTTGCGC TCTAGAACAA GGAGAAGCGG TTAAGCTTTC CGGCTTTGGT AATTTTGAGC TTCGTGATAA AGGAGAACGG CCAGGGCGCA ACCCTAAGAC GGGTGAAGAA ATTCCTATCA CTGCACGACG TGTGGTAACT TTTCGGCCTG GACAAAAACT TAAGGCGCGG GTAGAAGCCT ATGCTGGAGG CAAGCAATAA
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Protein sequence | MALTKADMTE TLYQELGLNK REAKEIVEMF FEDIRCALEQ GEAVKLSGFG NFELRDKGER PGRNPKTGEE IPITARRVVT FRPGQKLKAR VEAYAGGKQ
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