Gene Noc_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1144 
Symbol 
ID3706908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1251457 
End bp1252515 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID637737647 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_343178 
Protein GI77164653 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000293571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTA GCCCTTGTAT TGTGAGAACT AAAGAACCCA TGCAAGCATT AGCAGAAATA 
GTCGCAAAGG CTCGCCAGGC GGTGTCAGCC GCCCCTGATT TGCCAACCTT AGATGAATTG 
CGGGTTCGTT ATTTAGGTAA GAAGGGGGAG CTTACAGGCC ATTTTAAAGC GTTAGACCAG 
GTTAGCGCCG AGGAACGCCC CATTTTTGGC AAAGCGGTCA ATGAGGCTAA ACAAGCGCTG 
CAGAGCGAAA TCGAGGCCCG GCGCAAGGAC TTGGAACAAG CGGCACTAGA GGCGCGTCTT 
GCTTCAGAGG CGATTGATGT GACTTTGCCA GGTCGGGGTC TGGATGTGGG TGGGTTACAT 
CCGGTGACGC GTACCTTGGC GCGTATTGAG GCATTTTTCC GTTACGCGGG GTTCGAGATC 
CATGAAGGAC CGGAAGTAGA AGATGATTAT CATAACTTTG AAGCGCTTAA TATCCCGCCT 
TCCCATCCTG CTAGAGCAAT GCACGACACT TTTTATTTTG ATGCTCATAC CCTTTTGCGA 
ACCCACACCT CGCCGGTACA AATCCGGGTG ATGGAGCACC AGGGGCCGCC ACTGCGGATT 
ATTGCTCCTG GGCGAGTTTA TCGTTGTGAT TCCGATTTGA CTCATACTCC CATGTTCCAC 
CAGGTGGAAG GATTGCTGGT GGATGAGCAG GTGAGTTTTA CCGATCTCAA GGGTATTCTT 
TCGGATTTCC TGCGGGCCTA TTTTGAGCGA GAAGATCTAG AAGTTCGTTT TCGTCCCTCC 
TATTTCCCTT TTACGGAGCC ATCGGCGGAG ACCGATATTC AATGTGTTAA CTGCAGTGGC 
GAGGGTTGCC GGGTGTGCGG CCATACAGGC TGGCTAGAGG TGTTGGGTTG CGGTATGGTG 
CATCCTAAAG TTTTTGAGCA TGTGGGTATT GATAGCGAGC GGTATCTGGG GTTTGCATTT 
GGCCTGGGCG TTGAGCGACT GGCAATGCTT CGTTATGGAG TGAATGATTT ACGTTTGTTT 
TTTGAAAATG ATTTACGTTT CTTACGTCAG TTTAATTGA
 
Protein sequence
MEFSPCIVRT KEPMQALAEI VAKARQAVSA APDLPTLDEL RVRYLGKKGE LTGHFKALDQ 
VSAEERPIFG KAVNEAKQAL QSEIEARRKD LEQAALEARL ASEAIDVTLP GRGLDVGGLH 
PVTRTLARIE AFFRYAGFEI HEGPEVEDDY HNFEALNIPP SHPARAMHDT FYFDAHTLLR 
THTSPVQIRV MEHQGPPLRI IAPGRVYRCD SDLTHTPMFH QVEGLLVDEQ VSFTDLKGIL 
SDFLRAYFER EDLEVRFRPS YFPFTEPSAE TDIQCVNCSG EGCRVCGHTG WLEVLGCGMV 
HPKVFEHVGI DSERYLGFAF GLGVERLAML RYGVNDLRLF FENDLRFLRQ FN