Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1143 |
Symbol | rplT |
ID | 3706907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1251012 |
End bp | 1251371 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737646 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_343177 |
Protein GI | 77164652 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000341848 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAGAG TAAAACGAGG AGTAACGGCC CACGCCCGGC ATAAGAAGGT GATTGCTCAG GCCAAGGGCT ATCGCGGCCG GCGCAAAAAC GTCTACCGTG TTGCGAACCA GGCGATCACT CGTGCCAGCC AGTATGCCTA CCGTGACCGG CGCCAACGCA AACGGCAGTT CCGCGCTCTT TGGATCGTGC GTATTAATGC TGCTGCCCGC GAGTGCGGTC TTTCCTATAG CCGCCTTATC AGTGGATTGA AACGGGCTGC AATTGAGATT GATCGTAAGG TGCTTGCCGA TCTTGCTGTC AGAGATAAGG CAGCTTTTAC CACCATCGCC GAGCAAGCTA AAGTTGCGCT ATCGGATTAG
|
Protein sequence | MPRVKRGVTA HARHKKVIAQ AKGYRGRRKN VYRVANQAIT RASQYAYRDR RQRKRQFRAL WIVRINAAAR ECGLSYSRLI SGLKRAAIEI DRKVLADLAV RDKAAFTTIA EQAKVALSD
|
| |