Gene Noc_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1126 
Symbol 
ID3706961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1229251 
End bp1229889 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID637737627 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_343160 
Protein GI77164635 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATGGA GATTAAGTAA ACCGCAAGCA GCAACTTCCA TTGAACAAAG CAAAGGTTCC 
TTCGAAGATG CGATCCGACG TAATTTATTA TTTGCCCAGT TACAGGATCT GGTTGCCTGG
GGCCGAAAAA ATTCTCTCTG GCCTTATAAC TTTGGACTTT CCTGCTGCTA TGTGGAAATG
GTCACCAGTT TTACCAGTAA ATATGATATT GCCCGCTTTG GCGCGGAGGT CATCCGCGCC
ACCCCCCGAG AAGCGGATCT CATGGTGATT TCAGGGACGG TATTTATCAA AATGGCACCC
GTGATTAAAC GCCTCTATGA ACAGATGATG GAACCTCGCT GGGTCATTTC CATGGGTTCC
TGCGCCAATT CCGGCGGGAT GTACGATATT TACAGCGTGG TTCAAGGAGT CGATAAATTC
CTCCCCGTGG ATGTTTATGT ACCTGGCTGC CCCCCCCGCC CTGATGCCTT TCTGGAAGGG
TTGCTATTGC TTCAGGAAGC CATCGGCAAG GAACAACGCC CCCTAAGTTG GGCTATTGGT
CCCCAGGGAG TCGAAAGAGC GCCTAAACCT AGCCTGCGGG ATCAAAGGCG GGCTGAACGC
CAGAAGGCAA CGGTATTTCG GAGCCCGGAT GAGGTCTAG
 
Protein sequence
MRWRLSKPQA ATSIEQSKGS FEDAIRRNLL FAQLQDLVAW GRKNSLWPYN FGLSCCYVEM 
VTSFTSKYDI ARFGAEVIRA TPREADLMVI SGTVFIKMAP VIKRLYEQMM EPRWVISMGS
CANSGGMYDI YSVVQGVDKF LPVDVYVPGC PPRPDAFLEG LLLLQEAIGK EQRPLSWAIG
PQGVERAPKP SLRDQRRAER QKATVFRSPD EV