| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1125 |
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| Symbol | |
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| ID | 3706960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1227480 |
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| End bp | 1229261 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637737626 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_343159 |
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| Protein GI | 77164634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.64928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCTA GCCTCCAGCA ACCTACTCCG CCGATGGCCG GATTCACTCC CATTGCGGAG
ATTCTCTATC ACCAATTTGG CGAAGCAAAT TTCATCCGGC AGGAAACCCA CGATGGGGTT
CCCACCTTCT GGATAACCAA GGCACAAGTT TCTAAAATTT TACGGTACCT CAAAGCAGAA
CTGGCCCCCC CCTATCCCAT GCTCTATGAC CTAACGGCGA TTGATGAGCG GGTTCGAACC
CATCGGCCTG GCCAGCCAGC AAGCGATTTC ACCCTGGTCT ATCATCTTCT ATCCTTTATC
CGGAATGAGG ATCTTCGCCT CAAAGTGCCC TTACAGGGAG AATCTCCCTC CTTGCCAACC
ATCACCCCCA TTTGGCCCGC CGCCAACTGG TATGAGCGAG AAGTATGGGA TCTTTTTGGA
ATCAACTTTG AAGGCCATCC CCATCTTAGC CGTATTCTCC TGCCACCGAC CTGGCAAGGC
CACCCATTGC GCAAGGATCA CCCCGCCCGG GCAACCGAGG TAGACCCTTT TACCCTATCC
GAGGAAAAAC AGGCGCGGGA ACAGGAAGCT CTGCGTTTTA GACCAGAAGA CTGGGGGATG
CGGCGGGCCT CCGGCAGCAC CGACTTTATG TTCCTCAACC TTGGCCCCAA CCATCCTAGC
GTCCATGGAG TTTTCCGAAT TGTCCTGCAA CTGGATGGAG AAGAAATTGT CGATGCCGTG
CCCGATATCG GCTATCACCA CCGGGGCGCT GAAAAAATGG GGGAGCGCCA ATCCTGGCAT
ACCTATATTC CCTACACGGA TCGGATCGAC TACCTAGGGG GAGTGATGAA TAACCTCCCC
TATGTCCTGG CCGTCGAGCA GCTGGCCGGC ATCCAGGTCC CAGAGCGGGT CAAGGTCATT
CGGGTCATGC TGGCGGAACT CTTTCGCATC GCTAGTCATC TGGTGTTTTA CGGCACTTTT
GCCCAGGACG TGGGGCAGCT CTCCCCTGTT TTTTACATGT TCACGGATAG GGAACGGGTG
TTTGATATTA TCGAAGCCAT CTGTGGGGGC CGAATGCACC CCGAATGGTT CCGTATCGGC
GGTGTGGCCC AAGATCTACC CCGGGGTTGG GATGATTTGA TCCGGGATTT TCTGCGTTAT
TTGCCACCAC GCCTGGCTAA ATACGACAAG ATTGCCATGA ATAACCGAAT TCTTAAAAAA
CGCACCCAGG GTGTGGGAAG CTATACGATT GCCGAGGCCA TGGAATGGGG AGTCACCGGG
CCGGGCCTGC GCGCCTGTGG CCTGGAATGG GATTTTCGCA AACAACGCCC TTACTCCGGC
TATGAACAAT TCCAATTCGA CATCCCCGTT GCCCAGCACG GAGACTGTTA CGACCGATGC
TGGGTACGAA TCGAGGAAAT GCGCCAGAGT CTGCGGATCA TCGAGCAATG CCTCAACCAT
ATGCCGGCAG GTTCCTACAA GGCCGATCAC CCTCTGACCA CCCCGCCACG GAAAGAACGC
ACCATGCACG ACATTGAAAC CCTGATCTCC CATTTCCTGA GCGTGAGTTG GGGGCCCGTG
ATTCCAGCGG GGGAAGCTTG CGTGGGCATT GAAGCCACCA AGGGTAACAA TAGCTACTAC
CTGATTAGCG ATGGCCACAC GCAACCCTAT CGGGTCCGCA TCCGCACCCC TTCTTTTCCC
CATCTCCAAA TGATTCCCCT CATTAGCCGG GGATCGATGG TACCTGATCT GATTGCCACC
CTGGGCAGCA TCGATTTTGT GATGGCGGAT GTAGACCGGT GA
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| Protein sequence | MRSSLQQPTP PMAGFTPIAE ILYHQFGEAN FIRQETHDGV PTFWITKAQV SKILRYLKAE
LAPPYPMLYD LTAIDERVRT HRPGQPASDF TLVYHLLSFI RNEDLRLKVP LQGESPSLPT
ITPIWPAANW YEREVWDLFG INFEGHPHLS RILLPPTWQG HPLRKDHPAR ATEVDPFTLS
EEKQAREQEA LRFRPEDWGM RRASGSTDFM FLNLGPNHPS VHGVFRIVLQ LDGEEIVDAV
PDIGYHHRGA EKMGERQSWH TYIPYTDRID YLGGVMNNLP YVLAVEQLAG IQVPERVKVI
RVMLAELFRI ASHLVFYGTF AQDVGQLSPV FYMFTDRERV FDIIEAICGG RMHPEWFRIG
GVAQDLPRGW DDLIRDFLRY LPPRLAKYDK IAMNNRILKK RTQGVGSYTI AEAMEWGVTG
PGLRACGLEW DFRKQRPYSG YEQFQFDIPV AQHGDCYDRC WVRIEEMRQS LRIIEQCLNH
MPAGSYKADH PLTTPPRKER TMHDIETLIS HFLSVSWGPV IPAGEACVGI EATKGNNSYY
LISDGHTQPY RVRIRTPSFP HLQMIPLISR GSMVPDLIAT LGSIDFVMAD VDR
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