| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1124 |
|---|
| Symbol | |
|---|
| ID | 3706959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1226988 |
|---|
| End bp | 1227452 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737625 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 24 kDa subunit |
|---|
| Protein accession | YP_343158 |
|---|
| Protein GI | 77164633 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.251038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCA CTGAGGAAAT AAAAGCAATC GATGCCGAAC GGGCCCACTA TCCCACCGCT
CAGGCCGTCG GGATCGAAGC CATGAAAATC GTGCAGCACC ACCGAGGCTG GGTCTCCGAT
GAAAGCCTCC GGGAGATTGC CGAATATCTC GGCTTGAGCG TGGAATCCCT GGATGGAGCG
GCCACATTCT ACAATCTTAT TTTTCGCCGG CCAGTAGGCA AGCATGTCAT TTTAATCTGC
GATAGTGTGA GCTGTTGGAT CATGGGCTAC GAGCAACTCC GGGAACAATT GCAAACAGAG
CTTAAGATTG GGCTGGGGGA AACCACCCAG GATGGCCGTT TTACCCTGTT GCCCAGTTGC
TGCTTGGGGG CCTGCGAGCG CGCCCCAGTG ATGGTAGTGG ATCAGGATCT CCATGGCGAT
CTGGACTCGG AGAAGATAGG TGAAATTCTG GCGGGCTATG AATGA
|
|---|
| Protein sequence | MLSTEEIKAI DAERAHYPTA QAVGIEAMKI VQHHRGWVSD ESLREIAEYL GLSVESLDGA
ATFYNLIFRR PVGKHVILIC DSVSCWIMGY EQLREQLQTE LKIGLGETTQ DGRFTLLPSC
CLGACERAPV MVVDQDLHGD LDSEKIGEIL AGYE
|
|---|
| |