| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1117 |
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| Symbol | |
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| ID | 3707126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1218545 |
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| End bp | 1220518 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737618 |
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| Product | NADH-plastoquinone oxidoreductase, chain 5 |
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| Protein accession | YP_343151 |
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| Protein GI | 77164626 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.752039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGC TATTATGGTT AATCCCCACC CTGCCCCTAG CCAGCTCCGT GCTATTAATG
CTCGCCTCCG GGCGGTTACC CAAAAAGCTT AGTGCCTTGA TCGGAGTCGG CTCGGTGGGA
TTATCCGCCC TTCTGACCTC GGGGCTTGGC ATTGCGTTCC TGCAATCCCC CCCTGAAGGT
AATGCCTATA CGCAAATTTT ATGGACCTGG ATGGCCATCG GAAATTTTAC GCCCAGCATC
GGCCTTTATT TGGACTCCCT CTCCTTAGTG ATGACTCTAG TAGTCACCTG GGTAAGCTTT
CTAATCCATC TTTATTCCGC TGAATTCATG GCCAATGAGG CCGGTTATCA GCGCTTTTTT
GCCTATATGA ATCTATTCGT TGCCACCATG TTGATACTGG TGTTGGCCGA CGATCTGTTA
TTCCTCTATC TAGGCTGGGA AGGGGTGGGC TTGTGCAGCT ACTTGCTCAT TGGTTTTTGG
TACCAAGACT CGGCTAACGG CTACGCGGCC CGCAAGGCGT TTGTGGTGAC CCGAATAGGG
GATACCGCTA TGGCCCTAGG GCTGCTGTTA TTGGTCACTC ATCTGGGAAC GCTCAATATC
CAACTACTCA TGGAACGGGC TTCCCAGGCA TGGCCGGTGG GATCGAATTT AGCTATAGCT
GCCGCCGCTT TGATGCTAGG CGGCGCGCTT GGCAAATCAG CGCAGCTGCC GCTACAAACC
TGGCTGCCCG ACGCCATGGC CGGTCCTACC CCGGTCAGCG CCCTTATTCA TGCCGCTACC
ATGGTCACCG CCGGAGTCTA TCTTATCGCC CGGACCCATG TACTGTTCGA GCTGGCCCCC
CCCGTCCACG GAGCGGTGGC GGTAATCGGG GCCTTAACCC TGCTGCTAGC GGCCTGTAGC
GCCTTAGTAC AAACCGACAT TAAACGTATC CTGGCCTATT CCACCATGAG TCAAATCGGT
TATATGTTTT TAGCCTTAGG GGTCGGCGCC TGGTCGGCGG CTATCTTTCA TTTGATGACC
CATGCCTTCT TCAAAGCTCT ACTGTTCCTA ACCGCGGGTG TGGTGATTGC CAGCCTGGAT
CATGAACATA ATATTTTCAA GATGGGCGGC CTGCGAAAAC AGCTCCCCAT TGCCTTCTGG
AGCTTTCTCA TTGGCGGCGC CTCCTTGGCC TCCTTACCCC TTATTACCGC TGGTTTCTAT
AGCAAGGATT TAATTCTTTC CCAGGTATGG TCTTCCCCCT TGGGCGGCCC CTGGCTCTGG
ACGGCGGGCC TCCTGGGGGC CTTATTAACA GCGGTTTACA TCTTTAGGGC CTGGTTTATG
GTCTTTTTCG GCCTCCCCAA GGCAGCCGTT GGCAAAAAAC CAGGCATGCT TATAGCTATT
CCCTTGCTGA TACTCTCGCT GCTCTCCCTT GCGGGCGGCT GGATAGAACT GCCGCCAAGT
CTCGGAGGCC AGCCCCTATT TTCTAACCTG ATGCATTCAG CCCTCCCCGC CCTAGAAGCC
GGGCATGGAG ATCCGGGAAT AGAGATCAGT TTGCAACTGA TGGCCTCGGA TATTTCTGTG
TTAGGCGTTT TCTTAGCTTA TGTCTTTTTC TTGCGCCACC CCCACTGGCG ACAGACCCTG
TTAGCAAAAG CGCCGGTCTT GGCAGTAGGG CGTTTCTGGT ATGTCGGCTG GGGCTTTGAC
AGGCTATATC GCACACTGCT GGTGCGGCCT TTGCTGAGAT TCGCCCACTT CAATCGCGAT
GACTTTATCG ATGATCTCTC TCGAGGGGCA GTTTGGCCAG TGGCGGGGCC TTTCCTATGG
CTCGCCCGCG TGAATAAAGG TGATTTTATC AATACTTTTT ATCATGGAAT AGCACGTCTG
GCACAAATGG GCCACCAAGG ACTTAGTCGA ACCCAGACGG GGCAAATACG CTGGTATACC
GGGAGCGTTG CCGCTGGGGC AGCCCTTCTT ATCGCCATAG TGGTGCTCTT ATGA
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| Protein sequence | MLKLLWLIPT LPLASSVLLM LASGRLPKKL SALIGVGSVG LSALLTSGLG IAFLQSPPEG
NAYTQILWTW MAIGNFTPSI GLYLDSLSLV MTLVVTWVSF LIHLYSAEFM ANEAGYQRFF
AYMNLFVATM LILVLADDLL FLYLGWEGVG LCSYLLIGFW YQDSANGYAA RKAFVVTRIG
DTAMALGLLL LVTHLGTLNI QLLMERASQA WPVGSNLAIA AAALMLGGAL GKSAQLPLQT
WLPDAMAGPT PVSALIHAAT MVTAGVYLIA RTHVLFELAP PVHGAVAVIG ALTLLLAACS
ALVQTDIKRI LAYSTMSQIG YMFLALGVGA WSAAIFHLMT HAFFKALLFL TAGVVIASLD
HEHNIFKMGG LRKQLPIAFW SFLIGGASLA SLPLITAGFY SKDLILSQVW SSPLGGPWLW
TAGLLGALLT AVYIFRAWFM VFFGLPKAAV GKKPGMLIAI PLLILSLLSL AGGWIELPPS
LGGQPLFSNL MHSALPALEA GHGDPGIEIS LQLMASDISV LGVFLAYVFF LRHPHWRQTL
LAKAPVLAVG RFWYVGWGFD RLYRTLLVRP LLRFAHFNRD DFIDDLSRGA VWPVAGPFLW
LARVNKGDFI NTFYHGIARL AQMGHQGLSR TQTGQIRWYT GSVAAGAALL IAIVVLL
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