Gene Noc_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1112 
Symbol 
ID3707121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1212992 
End bp1213435 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content36% 
IMG OID637737613 
Producthypothetical protein 
Protein accessionYP_343146 
Protein GI77164621 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTA AATTGATGGG CTATTCACTG GTCATATTAC AATTCTTAGC AATTATTCTA 
TGCTGCTTAC CTTTTGGCTT AGGAGATAAA AACCTGATGG CAAGCCTATC TCTCGTGGCT
ATCGGAGCAG CAGGCGGAGT AATGACTCTG TATTTTAATC AATTAGGCAA CTTCAATATT
CATCCTGAAG TCAAGCCAAA TGCTTTGCTC ATTATCCATG GTCCTTACAA ATACATTCGT
CATCCTATGT ATACCAGCCT ATTTATAATG ATGCTGGGCA TCATTATCTA TAATTCTCAT
CCCTTAAATT TCCTTGGTCT AGCTGTTTTG ATTTTAGTTT TAATGGCTAA ATCTCGCATT
GAGGAAAATC TTCTTAGGGA ACGGTTTCCC ACCTACACAG ATTATATGGC AACAACAAAA
AAATTTATTC CTTTCATCTT TTAA
 
Protein sequence
MNTKLMGYSL VILQFLAIIL CCLPFGLGDK NLMASLSLVA IGAAGGVMTL YFNQLGNFNI 
HPEVKPNALL IIHGPYKYIR HPMYTSLFIM MLGIIIYNSH PLNFLGLAVL ILVLMAKSRI
EENLLRERFP TYTDYMATTK KFIPFIF