Gene Noc_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1092 
Symbol 
ID3707081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1198701 
End bp1198982 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content45% 
IMG OID637737594 
ProductSelT/selW/selH selenoprotein 
Protein accessionYP_343127 
Protein GI77164602 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3526] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02174] selT/selW/selH selenoprotein domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.805938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATA AAATAGAAAT CCAATACTGT ACCAAGTGCC GTTGGTTGCT TAGAGCAGCC 
TGGATAGCGC AAGAACTATT AACAACCTTT GAGCAGGAAA TTTCAGAATT AACGCTGCGC
CCTGGAACCG GTGGCGTTTT CAATATATTT GCTAACGGTA AGCTTGTCTG GTCGCGAAAA
GAAGCCGGTC GATTCCCCGA GATTACCGAG CTAAAGCAGC TTGTCAGAAA CCAAATAGCC
CCCACCAAGG ATCTGGGTCA TGCGGATAAA AAACATAAAT GA
 
Protein sequence
MSNKIEIQYC TKCRWLLRAA WIAQELLTTF EQEISELTLR PGTGGVFNIF ANGKLVWSRK 
EAGRFPEITE LKQLVRNQIA PTKDLGHADK KHK