Gene Noc_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1088 
Symbol 
ID3707077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1193648 
End bp1194247 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content49% 
IMG OID637737590 
ProductMarR family transcriptional regulator 
Protein accessionYP_343123 
Protein GI77164598 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGC AAAAGCTGTT TCAGCTACTA GAGCGTGTTG GCACCCTGCT GCGGGCAGAA 
GAACGTAAAT CGGCAACGAC ACTAAACCTA CATCCGGCTC ATCTCCAAGT TTTACGTTAT 
CTTGCCCAAT GTAATCGGTA CAGCGATACA CCTATGGCGG TATCAGAGTA TCTTGGCACC 
ACCAAGGGTA CAACTTCCCA ATCATTGTTG GTATTACAAC GGCAAGGATA CCTCCGAAAA 
AAATCCGATC CGAAAGATCG GCGCGTCGTC CATTTAGAAC TCATGCCGAA GGGCCGGGCA 
CTTACCAGAA AACTTGCTTT ATTGGCCAAT AAGGAAAAAA CCCTAGCCGG GTTAGCCACG 
GCAGAATTGC AAGTCACTCA GCAAGTTCTG GAACGATTGT TATGCGATCT TCAAAAAGCA 
AATCACCACC GCACCTTTGG CCAATGCCAT ACCTGCCGGT ATTTGCTAAC GACCCATGAC 
AAACAGCTTT TCCGTTGTGG CCTAACCCAG GAACTGCTCA GGGCGGAAGA AACTCTAAAG 
ATTTGCCAGG ATCATGCCTT CCCCTCCCCT TCCCGCAGCC TGGAAATTAC AGCAAATTAA
 
Protein sequence
MDKQKLFQLL ERVGTLLRAE ERKSATTLNL HPAHLQVLRY LAQCNRYSDT PMAVSEYLGT 
TKGTTSQSLL VLQRQGYLRK KSDPKDRRVV HLELMPKGRA LTRKLALLAN KEKTLAGLAT 
AELQVTQQVL ERLLCDLQKA NHHRTFGQCH TCRYLLTTHD KQLFRCGLTQ ELLRAEETLK 
ICQDHAFPSP SRSLEITAN