| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1078 |
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| Symbol | |
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| ID | 3707203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1183345 |
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| End bp | 1184376 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737580 |
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| Product | putative dehydrogenase |
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| Protein accession | YP_343113 |
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| Protein GI | 77164588 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCC CGCCACCACG CTTAGTCCCA TCTATTGCCC GGGCTTATTG GGTGGAAGCG
TCCGGGAAAG GCGCCATTCG CCAGGAAACG CTCTCTGTGC CGGTACCAGT GGGTTATAGC
CTCCTTGAAA CCTGGCTAAC TGGAATCAGC CCTGGGACAG AGCGATTGGT CGGATTGGGG
AAGGTACCCG CGGAATGCCA GCAAGCCATG GCTTGCCCTG CTATGGGGGG ATCATTCAAG
CTGCCAGTCA AATACGGATA TTGCCTCCTA GGCCAGGCTA TTAATGGCCC CTACGCTGAC
CAGCTCGTCT TTACCATGCA TCCCCACCAA GATTACGCAA TTGTCCCCAA TAAGCAACTA
TTACCCCTCC CTCAGGATAT ACCCCCTCTA CGGGCTACGC TGCTTCCTAA CCTGGAAACC
GCCCTGAACG CCATTTGGGA CAGCGAATAC CAGGCGCCAG CGCCGGTAGC CATCGTCGGT
GGCGGCATTG TGGGCTTGCT TATCGCCTTT TTGCTCAAAA CCGCCTGGGA TGCCTTCCCT
ATTATCATTG AGCGCGATCC GCAGCGTCGG CAACTCATTG AAAAACTAGG ATGGGGACTT
ACTGTCCTTG AAGTCCAGGA GGCCCCCCAG GGGGTATTTT CCCTCTGTTT TCATGCCTCG
GGACAAGGAG CAGGACTGCA AACAGCCTTG GATAGCGTGG GGTTTGAAGG AAAAGTCATT
GAGGTGAGCT GGTTGGCTCA TCAGCCAGTC ACCCTTAACC TGGGCGGATC TTTTCACTTC
CAAAGGAAAC AGATTCTCTC TTCCCAAGTC AGCACGATTG CCAAACCCAA GCGGGAACAT
ACGAGCCACC AGCAGCGTTT AGAGCAGACC CTGAATTATT TGCAAAGCCC CTTACTTGAT
GCTCTTATTG CCCCAGCGAT CACCTTTGAG AGCCTGCCTC TTTTTATGCA GGAACTCTAC
CATAAAAATC CGGTCGACTT TTCCTTTGCC GTGACCTATC CACCCTTTCA TCCTCGACTC
CACAAAGCCT AA
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| Protein sequence | MSTPPPRLVP SIARAYWVEA SGKGAIRQET LSVPVPVGYS LLETWLTGIS PGTERLVGLG
KVPAECQQAM ACPAMGGSFK LPVKYGYCLL GQAINGPYAD QLVFTMHPHQ DYAIVPNKQL
LPLPQDIPPL RATLLPNLET ALNAIWDSEY QAPAPVAIVG GGIVGLLIAF LLKTAWDAFP
IIIERDPQRR QLIEKLGWGL TVLEVQEAPQ GVFSLCFHAS GQGAGLQTAL DSVGFEGKVI
EVSWLAHQPV TLNLGGSFHF QRKQILSSQV STIAKPKREH TSHQQRLEQT LNYLQSPLLD
ALIAPAITFE SLPLFMQELY HKNPVDFSFA VTYPPFHPRL HKA
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