Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1073 |
Symbol | |
ID | 3707198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1180119 |
End bp | 1181105 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737575 |
Product | ribonuclease BN |
Protein accession | YP_343108 |
Protein GI | 77164583 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGACTT CAAAACAGAT TGTAGACCGC AGGGGTCGAA AGGCCCGTCA TCCGGGGGAA ATTCCCACTA AGGGATGGCG TGATATTGCC TACCGGATTA AAGATTCTTT GGACGATGAT AATATTTCTA TCGTTGCAGC GGGGGTTGCT TTCTATGCTT TGCTGGCTAT TTTTCCCGCT TTGGTGGCGA TGGTTTCCAT CTATGGAATA ATAGCTGATC CCGCCGATGT TCAGCGCCAA TTCGATGCCC TCAGTGGTAT CTTGCCGACA GAAGCACAAG TGTTATTGAG TGAGCAATTG CGCCGGATTA CCTCTCAAGC TTCAACAGCT TTGAGCGTGG GCGTGGGGGT AGGGGTGATT TTGGCCCTTT GGAGTGCCAC CCGAGGCACG AAGGCGTTTA TAATTGCTTT GAATATTGTG TATGGTGAAA AGGAAAAGCG CGGTTTTTTA AAATTAAACG CGATTGCCCT AATGCTGACT CTGGGTGCCA TCGTGCTGGC TATTTTAGCC CTGGGCATGA TCGTGGTTTT GCCGATTTTG CTTAGTTATC TTGATTTGCC CGAAATTTTT CAGGTCTTAG CCTCTCTTTT GCCCTGGTTG CTATTAGCGT TCACCTTTAT ATTGGGCCTG GCGGTGCTTT ACCGTTACGG GCCTAGCCGG AGCGAGGCTC GGTGGCGGTG GGTAAGCTGG GGGGCAGTTG CCGCCACCGT ACTTTGGATA GTTGGCTCCG CCTTGTTTTC GTTTTATGTC GCCAATTTCG CTCAATACAA CAAAACCTAC GGTTCAGTCG GCGCCCTTAT TATTTTGCTC ATGTGGTTTT TTGTAACGGC CTACATTATT TTGCTTGCCG CTGAATTCAA TGCCGAAATG GAGCACCAAA CAAAGGTTGA TACGACTAGA GGGAAGCCTC AGCCGATGGG AGAACGCGGT GCCTACGTGG CCGATACCGT GGGTAAGCCT TACGGCGATG AAACCGGTGC CCCTTGA
|
Protein sequence | MPTSKQIVDR RGRKARHPGE IPTKGWRDIA YRIKDSLDDD NISIVAAGVA FYALLAIFPA LVAMVSIYGI IADPADVQRQ FDALSGILPT EAQVLLSEQL RRITSQASTA LSVGVGVGVI LALWSATRGT KAFIIALNIV YGEKEKRGFL KLNAIALMLT LGAIVLAILA LGMIVVLPIL LSYLDLPEIF QVLASLLPWL LLAFTFILGL AVLYRYGPSR SEARWRWVSW GAVAATVLWI VGSALFSFYV ANFAQYNKTY GSVGALIILL MWFFVTAYII LLAAEFNAEM EHQTKVDTTR GKPQPMGERG AYVADTVGKP YGDETGAP
|
| |