Gene Noc_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1073 
Symbol 
ID3707198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1180119 
End bp1181105 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content50% 
IMG OID637737575 
Productribonuclease BN 
Protein accessionYP_343108 
Protein GI77164583 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACTT CAAAACAGAT TGTAGACCGC AGGGGTCGAA AGGCCCGTCA TCCGGGGGAA 
ATTCCCACTA AGGGATGGCG TGATATTGCC TACCGGATTA AAGATTCTTT GGACGATGAT
AATATTTCTA TCGTTGCAGC GGGGGTTGCT TTCTATGCTT TGCTGGCTAT TTTTCCCGCT
TTGGTGGCGA TGGTTTCCAT CTATGGAATA ATAGCTGATC CCGCCGATGT TCAGCGCCAA
TTCGATGCCC TCAGTGGTAT CTTGCCGACA GAAGCACAAG TGTTATTGAG TGAGCAATTG
CGCCGGATTA CCTCTCAAGC TTCAACAGCT TTGAGCGTGG GCGTGGGGGT AGGGGTGATT
TTGGCCCTTT GGAGTGCCAC CCGAGGCACG AAGGCGTTTA TAATTGCTTT GAATATTGTG
TATGGTGAAA AGGAAAAGCG CGGTTTTTTA AAATTAAACG CGATTGCCCT AATGCTGACT
CTGGGTGCCA TCGTGCTGGC TATTTTAGCC CTGGGCATGA TCGTGGTTTT GCCGATTTTG
CTTAGTTATC TTGATTTGCC CGAAATTTTT CAGGTCTTAG CCTCTCTTTT GCCCTGGTTG
CTATTAGCGT TCACCTTTAT ATTGGGCCTG GCGGTGCTTT ACCGTTACGG GCCTAGCCGG
AGCGAGGCTC GGTGGCGGTG GGTAAGCTGG GGGGCAGTTG CCGCCACCGT ACTTTGGATA
GTTGGCTCCG CCTTGTTTTC GTTTTATGTC GCCAATTTCG CTCAATACAA CAAAACCTAC
GGTTCAGTCG GCGCCCTTAT TATTTTGCTC ATGTGGTTTT TTGTAACGGC CTACATTATT
TTGCTTGCCG CTGAATTCAA TGCCGAAATG GAGCACCAAA CAAAGGTTGA TACGACTAGA
GGGAAGCCTC AGCCGATGGG AGAACGCGGT GCCTACGTGG CCGATACCGT GGGTAAGCCT
TACGGCGATG AAACCGGTGC CCCTTGA
 
Protein sequence
MPTSKQIVDR RGRKARHPGE IPTKGWRDIA YRIKDSLDDD NISIVAAGVA FYALLAIFPA 
LVAMVSIYGI IADPADVQRQ FDALSGILPT EAQVLLSEQL RRITSQASTA LSVGVGVGVI
LALWSATRGT KAFIIALNIV YGEKEKRGFL KLNAIALMLT LGAIVLAILA LGMIVVLPIL
LSYLDLPEIF QVLASLLPWL LLAFTFILGL AVLYRYGPSR SEARWRWVSW GAVAATVLWI
VGSALFSFYV ANFAQYNKTY GSVGALIILL MWFFVTAYII LLAAEFNAEM EHQTKVDTTR
GKPQPMGERG AYVADTVGKP YGDETGAP