Gene Noc_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1056 
Symbol 
ID3707239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1163175 
End bp1163516 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content48% 
IMG OID637737561 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_343094 
Protein GI77164569 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00140547 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGCT CCAACGATGA GGATTATCAG CTTATCTTTT GCACCTGTCC CGACCAAGAG 
ACGGCAGAAA AACTTGCGGC CCGACTGGTG GAGAAACGGC ACGCCGCTTG CGTAAATATT
GTCCCGGGAC TGACATCAGT GTACCGTTGG CAGGGAAAAA TCGAAACGGA CAGTGAATGT
TTGCTATTAA TAAAATCCCG TGCTACTCAT TACTCGGCAC TGGAACGGCT CATAGAGGAA
CAGCATCCCT ATGAACTTCC AGAAATTATT GCGGTCCCTA TCGGCAGGGG CCTGGATGGC
TATTTGCATT GGATAGATAA AGAGTTACGC CAATTATCAT GA
 
Protein sequence
MSSSNDEDYQ LIFCTCPDQE TAEKLAARLV EKRHAACVNI VPGLTSVYRW QGKIETDSEC 
LLLIKSRATH YSALERLIEE QHPYELPEII AVPIGRGLDG YLHWIDKELR QLS