Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1054 |
Symbol | |
ID | 3707237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1160774 |
End bp | 1161295 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637737559 |
Product | thioredoxin |
Protein accession | YP_343092 |
Protein GI | 77164567 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000221964 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAAA TTATCCGCTG GCCTTTAATC CTCACCGTGG CCCTATTAGC CGGAATTGGG GGATATATTC TATACCAAAC GCAGCAAGAT GATCGTCCTA CTACGGGACC CATTCGGCCA GTGTTTAAAC TTCCAGATGC CCATGGCACC GAGCATGATA TCCGGGAGTG GGATGGCAAG GTAGTGGTTA TCAATTTTTG GGCAACCTGG TGCCCACCGT GCCTAGAGGA GATTCCTGAG TTTATTGAGT TACAGCGTTC TCTGGGAGAG CAGGGACTCC AGTTTATCGG AGTAGCCATC GACAGGCCCG ATAAAGTCAA GGCATTTATC AAGGAGTATG GCATTAACTA TCCCATCCTC GTGAGCGAAG AAAAAGCCCC TAGGGTAGCT ATGGATTACG GTAACGAACT GGATGTCGTT CCTTATACTG CCTTCATTAA CCGAGCTGGC CAGATTGTCT ATACTCACGC AGGGGTTTTA GATAAAGAGA CCACAAAAAG CTTTATTTTA CCATTGCTAT AG
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Protein sequence | MNKIIRWPLI LTVALLAGIG GYILYQTQQD DRPTTGPIRP VFKLPDAHGT EHDIREWDGK VVVINFWATW CPPCLEEIPE FIELQRSLGE QGLQFIGVAI DRPDKVKAFI KEYGINYPIL VSEEKAPRVA MDYGNELDVV PYTAFINRAG QIVYTHAGVL DKETTKSFIL PLL
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