| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1041 |
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| Symbol | |
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| ID | 3707263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1149947 |
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| End bp | 1150753 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737546 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_343079 |
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| Protein GI | 77164554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0593866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGAAC GCCTACAAAA AATATTGGCC CGGGGAGGAC TGGGGTCCCG CCGGGAAGTT
GAAGAGTGGA TTAAGGCGGG CCGAGTCCGA ATCAACGGCA TTCCCGCGCG CTTAGGCGAC
AAGGTATCAG ATGAGGATCA GGTGACTGTT AATGGGAGAC CCTTATCGCC TAGGCGGTTG
CAGGCTCCTT CTTCCCAGGT CATCCTTTAT CATAAACCGG CAGGTGAAAT CTGTAGCCGC
AAGGATCCGG AAGGGCGCCC GACTGTGTTC CGGTCCTTAC CTCGCCCCCG GCAGGGCCGT
TGGGTAAGCG TTGGGCGTTT GGATATCAAT ACCTCTGGTC TCTTATTGTT CACGACCGAC
GGTGAACTGG CTAACCGTTT GATGCATCCT TCCACCCAAG TGGAGCGGGA ATATGCCGTG
CGGGTTTTGG GTACTGTAAC GGAAGTCATC CTTGAGCGCT TGCAGAGAGG GGTGCAATTG
GAGGATGGTC TAGCCAGTTT TAAGCGAATA CTGGATGCTG GCGGTGAAGG CGCTAATCAC
TGGTATCATG TCATACTCTG GGAGGGACGG AAGCGGGAAG TTCGGCGCCT TTGGGAATCC
CAGGGGATTC AAGTGAGCCG GCTGATACGC ATTCGTTTCG GTCCCGTCAG CTTGCCTCCT
GGGTTGCGAA TGGGCCGCTG GCGCTTTCTG GAACCATCTG AGTTTAAAGC TTTGTTAGAG
ATAGGGGGCG TGGAGCAGCG CACTACCAGG TTTCAGCCCC GCAGTAAAAA TAATCGAAGG
GGTAGGCAAG GTCGGAAACA AGGTTGA
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| Protein sequence | MAERLQKILA RGGLGSRREV EEWIKAGRVR INGIPARLGD KVSDEDQVTV NGRPLSPRRL
QAPSSQVILY HKPAGEICSR KDPEGRPTVF RSLPRPRQGR WVSVGRLDIN TSGLLLFTTD
GELANRLMHP STQVEREYAV RVLGTVTEVI LERLQRGVQL EDGLASFKRI LDAGGEGANH
WYHVILWEGR KREVRRLWES QGIQVSRLIR IRFGPVSLPP GLRMGRWRFL EPSEFKALLE
IGGVEQRTTR FQPRSKNNRR GRQGRKQG
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