Gene Noc_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1039 
Symbol 
ID3707261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1148449 
End bp1149258 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID637737544 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_343077 
Protein GI77164552 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.287591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT CATCCGGGCA AGTCCCATCT TCAGAAGCAT CGGCGCTAGC TGTCGTCCGA 
GGACAGCCTC TTATTGAATT ACCTACCGAT CTTTATATCC CTCCTGATGC TTTAGAAGTT
TTTCTTGAAG CTTTTGAGGG GCCGTTAGAT CTGTTGCTTT ATTTGATTCG GCGGCAGAAT
TTGGATGTTT TGGATATCCC GATTGCTGTT ATTACCCATC AATATATGGA ATATATAGAG
ATTTTGGGGG AGCTGCGTTT AGAATTAGCA GCCGAGTATC TAGTGATGGC TGCTTGGCTT
GCGGAAATCA AGTCCAGGAT GCTTTTGCCC CGTCCCCAGG AGAGCGCTGA GGAAGAGGGA
GATCCCCGAA TGGAACTGGT GCGCCGTCTG CAAGAGTACG AGCGTTATAA AAAAGCGGCT
GAAGATTTGG ATTCATTGCC TCGTGTGGGT CGGGATATCT TCGAGACCGG AGTTCATGTT
CCCCCGGGGC AGGTGACCAA ACCGCAGCCC ACACTCGAGT TAACTGATCT CTTATTTGCG
CTTAAAGGCG TGCTGGCCCG GGCAGATCTG TTTAGCCACC ACCATGTGGC CCAAGAAACT
CTATCGGTAC GGGAACGTAT GGGAGAGGTG CTAAGCCGGG TTGAGGCGGA TAGCTTTTTT
GAATTTACTG CTTTATTGCA TCCAGAGGAG GGGCGCTTGG GGGTGGTGGT CACTTTTCTG
GCAATTCTCG AGCTAATTAA AGAATCCCTG CTGGAAGTAG TTCAGGCTGA ATCCTATGGT
CCCCTCCATG TACGGGCGGT AGCAGCATGA
 
Protein sequence
MSESSGQVPS SEASALAVVR GQPLIELPTD LYIPPDALEV FLEAFEGPLD LLLYLIRRQN 
LDVLDIPIAV ITHQYMEYIE ILGELRLELA AEYLVMAAWL AEIKSRMLLP RPQESAEEEG
DPRMELVRRL QEYERYKKAA EDLDSLPRVG RDIFETGVHV PPGQVTKPQP TLELTDLLFA
LKGVLARADL FSHHHVAQET LSVRERMGEV LSRVEADSFF EFTALLHPEE GRLGVVVTFL
AILELIKESL LEVVQAESYG PLHVRAVAA