Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1037 |
Symbol | |
ID | 3707259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1146459 |
End bp | 1147160 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737542 |
Product | peptidase M50 |
Protein accession | YP_343075 |
Protein GI | 77164550 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.489327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TGTCAATCGT ACAGCGGATT GCCATTTGGG TGTTGCCTAT ATTGTTCGCT ATTACCGTCC ATGAGGTAGC GCATGGTTGG ATGGCGCTTC GATTGGGGGA TCACACTGCG CAAATGATGG GCCGGTTAAC GCTCAATCCC ATCAATCATA TCGATCCTAT TGGTACTTTG GTCGTTCCAG GGGTTTTATT ATTACTCGGC GGCGTTGTTT TTGGTTGGGC CAAGCCGGTA CCGGTGTCCT GGGATAAACT TCGCAATCCT CAGCGGGATA TGGCCATTGT TGCTTTGGCG GGACCGATGG CCAACCTCAT TATGGCTGTT TTCTGGGCGG TAGTATGCCG CCTGGGAATT GCTTTGGCGC TAGAGTTTCC CATGATGGGG GTGCCGCTAG CTTATATGGG GATTGCTGGG ATGCTCATTA ATGCCATCTT GATGATGCTA AATCTCATCC CCTTACCCCC TCTCGATGGA GGAAGAGTAT TGGTTGGAAT ATTGCCTGGC CCGCTTGCCT ATAAGGTAAG CCGTATTGAG CCTTATGGGC TTTTTATACT CCTTGGCCTG CTATTTACCG GTATTTTACA GGGTATCTTG GGACCCTTGG TAGATCTGCT TTTAAGTGGA TTAGTAGAGC TAGTAGGTGT GCCAAAGCGG GAATTTGTCG GAGGATTGTT AACTCTAATG GGAGCCCAAT AA
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Protein sequence | MEELSIVQRI AIWVLPILFA ITVHEVAHGW MALRLGDHTA QMMGRLTLNP INHIDPIGTL VVPGVLLLLG GVVFGWAKPV PVSWDKLRNP QRDMAIVALA GPMANLIMAV FWAVVCRLGI ALALEFPMMG VPLAYMGIAG MLINAILMML NLIPLPPLDG GRVLVGILPG PLAYKVSRIE PYGLFILLGL LFTGILQGIL GPLVDLLLSG LVELVGVPKR EFVGGLLTLM GAQ
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