Gene Noc_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1036 
Symbol 
ID3707258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1145100 
End bp1146383 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content52% 
IMG OID637737541 
Productseryl-tRNA synthetase 
Protein accessionYP_343074 
Protein GI77164549 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATC CAAAATTACT TAGAAATGCC CTTGCCGATA CCACTCGCCA ATTGGCACGG 
CGGGGATTTG AATGGGATGC GGCTGCTTTT GCTACGCTGG AGGCGGAGCG CAAGGAGATG
CAGGTCTGCA CTCAAGAGCT CCAGGCTAAA CGGAACGCCC GTTCCAAGAT TATTGGTAAA
GCCAAGGCGC AAGGAGAAGA TATTGCCCCC TTGCTGGCGG AGATGACGGA ACTGGGGGAT
CACCTTAAAA CCGTGGAAGC GCGGTTGGAA GTGGTTCAGG CCCAGATTGA GGAGATTCTG
CTGGGAATCC CTAATCTACC CGACGCCAGT ACGCCGCCAG GCAAGGATGA GCAAGACAAT
GTAGAGGTGC GACGTTGGGG TACGCCGCCT GCTTTAGAGT TCGTTCCTAA AGATCATGTG
GATTTGGGGG CGTCTTTGGG GATGGATTTT GAAACTGCGG TAAAACTTAG CGGAACCCGT
TTTGTTACCC TTATAGGGCC TTTAGCCCAA TTACACCGGG CGCTTATCCA GTTTATGCTG
GACGTACACA CTCGCGAGCA TGGCTATACT GAGGTTTATG TCCCCTATTT GGCAAACCGG
GAATCTTTAG TGGGAACCGG GCAGTTGCCT AAGTTTGAGG AAGGTTTGTT TGCTATCCGG
GATACCGGCT ATTATCTTAT TCCAACCGCT GAAGTGCCGG TAACCAATCT TGTACGGGGG
GAAATTCTGC TTGCTGAACG CCTGCCTCTC AAGTATGTAG CCCATACACC CTGCTTTCGG
AGCGAAGCTG GTTCCTATGG CAAGGATACT CGGGGTATGA TCCGCCAGCA CCAGTTTGAG
AAGGTAGAAT TAGTACAGAT TGTGCCGCCG GAAGTTTCCC AGCAGGCCCA TGAAGACCTG
ACGGGTCACG CGGAGGCTAT TTTGCAGCGG TTAGGGCTTC CTTATCGGGT GATGAATCTT
TGTGCTGGCG ATCTTGGTTT TGCCAGCAGT AAGACCTATG ACCTGGAGGT ATGGTTGCCA
GGCCAGCAAA CCTACCGGGA GATCTCCTCT TGTAGTAATT TCTTAGATTT TCAAGCGCGC
CGGATTCAAG CTCGCTGGCG CGATCCAAAG ACCCAGAAAC CAGCATGGGT CCATACTCTC
AACGGTTCTG GACTAGCCGT GGGCCGGACT TTATTGGCCT TGATGGAAAA TTATCAACAG
GCTGATGGCA GTATCCGGAT ACCAGAAACC TTACAGCCCT ATATGGGGGG TGTTTCAGTG
CTTCAACCTT CCATAAGGGG GTAG
 
Protein sequence
MLDPKLLRNA LADTTRQLAR RGFEWDAAAF ATLEAERKEM QVCTQELQAK RNARSKIIGK 
AKAQGEDIAP LLAEMTELGD HLKTVEARLE VVQAQIEEIL LGIPNLPDAS TPPGKDEQDN
VEVRRWGTPP ALEFVPKDHV DLGASLGMDF ETAVKLSGTR FVTLIGPLAQ LHRALIQFML
DVHTREHGYT EVYVPYLANR ESLVGTGQLP KFEEGLFAIR DTGYYLIPTA EVPVTNLVRG
EILLAERLPL KYVAHTPCFR SEAGSYGKDT RGMIRQHQFE KVELVQIVPP EVSQQAHEDL
TGHAEAILQR LGLPYRVMNL CAGDLGFASS KTYDLEVWLP GQQTYREISS CSNFLDFQAR
RIQARWRDPK TQKPAWVHTL NGSGLAVGRT LLALMENYQQ ADGSIRIPET LQPYMGGVSV
LQPSIRG