| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1018 |
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| Symbol | |
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| ID | 3707279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1129157 |
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| End bp | 1129936 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737523 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_343056 |
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| Protein GI | 77164531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATAG CGCTTGGTCT TGAGTATGAT GGTTCCAATT TTTCTGGCTG GCAGTCCCAA
AAAGGCGTGC GTACAGTCCA AGCTACTCTG GAGCAGGCCC TTTCCGCAGT GGCTAACGAG
CCGGTTACTG TCATCACTGC GGGGCGTACC GATGCAGGAG TGCATGCCGC GGCCCAGGTG
GTTCATTTTG ACACCGCCAC TTTTCGTTTA GAGCACAATT GGGTTTTTGG CGGCAATGCC
AATCTGCTGC CGGAGGTGGC CATTTTATGG GCACAACCGG TGAACGAAGC TTTTCATGCC
CGGTTTTCGG CGATAGCGCG GCACTATCGA TATATCATTC TGAACCGCGG GGCGCGGCCA
GCTATCGCGA ATCGCCGCGT GACGTGGTAT TGTCAGCCTT TATCCGTTAC TAAAATGAAG
GAAGCAGGTG CTTTTCTGGT GGGCGAACAT GATTTTTCTT CCTTTCGAGC TAAGGCTTGC
CAGGCTAAGA GCCCTGTCAG AAATGTCCAT TATTTAGAGG TGACACGGCA AGGGGATTGG
ATCGTCATCG ATATCTCGGC CAATGCTTTT TTGCACCATA TGGTACGTAA TATCGCTGGG
GTACTTATGG CGATAGGGAA GGGAGAACAA CCGCCGCGCT GGGCGGAAGA GGTATTACAG
GCTCGATGCC GTGCTGTGGG AGGTGTTACT GCGCGTCCCG ATGGTTTGTA TTTGGTGAGA
GTGGACTATC CAGATCACTT TGATTTACCC AGACTTTCCC GTCCCGTCAC GGTTTGGTAA
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| Protein sequence | MRIALGLEYD GSNFSGWQSQ KGVRTVQATL EQALSAVANE PVTVITAGRT DAGVHAAAQV
VHFDTATFRL EHNWVFGGNA NLLPEVAILW AQPVNEAFHA RFSAIARHYR YIILNRGARP
AIANRRVTWY CQPLSVTKMK EAGAFLVGEH DFSSFRAKAC QAKSPVRNVH YLEVTRQGDW
IVIDISANAF LHHMVRNIAG VLMAIGKGEQ PPRWAEEVLQ ARCRAVGGVT ARPDGLYLVR
VDYPDHFDLP RLSRPVTVW
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