Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0992 |
Symbol | |
ID | 3707384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1098727 |
End bp | 1099926 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737498 |
Product | hypothetical protein |
Protein accession | YP_343031 |
Protein GI | 77164506 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00160861 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACATTC ATTCTTATTA CTTAACCTCC GCCCCCAGAA AGCGATTCAT TAGCTATGTC TGGATTGCTT CTGCCTTAAT ACTTTTACTC AGCGGCTGCG CTCCTAAGCA AAGTTATGAT GCAGCACTAA TACTGGCAGA CATTGCAGCC CAGGAAACGC CTTCACACTG GAAATCCGCT ACCCCCGCTC CTAACCAAAA AGAGATCACC TATAGGATCA GGAACCGCAT CCACCGTGGA ACGCTTTATC TACCCGCCTC CGCGCCTCCT CAAGCGGGAA TCGTATTAAT CCCTGGTATC GTTCCCCGTG GCAAAGATGA CTCTCGCCTA ATCGCCTTTG CCAAAACTTT AGCACGGGCT CGCTTTGCCG TGTTCACTCC AGAGTTAAAA GAGTTTCGGC ATCTCCAAGT AAGGCCGGAA CACCCGCGGG TAATTGCCGA TGCCCTTCTC TATCTGGCGA GTCGTCCTGA GCTGATTCCT CCAGGCCATC TGGGAATCGG GACCTTCAGT TTCTCTGTGG GTCTAGGAGT CATTGCCGCC CTCGAAGAAG ATGCCCGTAC CAAGGTGCAA TTCATTCTTG GAGTAGGCGG CTATTATAAT TTAGAAACGA CTATCCGCTT TTTTACCACA GGTTATCTTT CAGACAACAC TTATTATCCA AATCCCAGTG AATACGGAAA GCTTGTCTTT GCGGCAACCA GCCTTAACTA CCTTACCAAT TCAACGGATC AAATGGTCCT AGAAGAGATG ATACAGATTA AGATCCGCAA TCCGGATGCG GAGATTGCCT CTCTCGCGCC TCACTTAGGA CCGGCGGGAA AAGCCGTCTA TACTCTTTTA AGTAACACCG ACCCAGAAAA AGTCCCCGGC CTCATCCGAA CCCTACCAGC GGAGCTTCAC CAGTTCATCA AAAACTTTAG CCTAAGCAAT AAAGATTTAA CCCAGCTTCA AGCCCAGCTC TTCCTCATCC ACGGTAAGAA CGATCCTCTC ATCCCTTATA CTGAAAGCCT CGCCTTAGCC GATGCTTTGC CTCCCAAGCA AACGAAGGTG TACTTAATAG AACAGGTGCT CACCCACGTA GACTTTAACT TTCAAAGCCT CTTTACCCGT GCCTTCTGGA CTGAGGAACT ACCGGATCTA TGGCGAATGT ACCGAGTCAT CTACGCCCTG CTTGGAAAAC GGGCACAAAC CGATCCGTAG
|
Protein sequence | MNIHSYYLTS APRKRFISYV WIASALILLL SGCAPKQSYD AALILADIAA QETPSHWKSA TPAPNQKEIT YRIRNRIHRG TLYLPASAPP QAGIVLIPGI VPRGKDDSRL IAFAKTLARA RFAVFTPELK EFRHLQVRPE HPRVIADALL YLASRPELIP PGHLGIGTFS FSVGLGVIAA LEEDARTKVQ FILGVGGYYN LETTIRFFTT GYLSDNTYYP NPSEYGKLVF AATSLNYLTN STDQMVLEEM IQIKIRNPDA EIASLAPHLG PAGKAVYTLL SNTDPEKVPG LIRTLPAELH QFIKNFSLSN KDLTQLQAQL FLIHGKNDPL IPYTESLALA DALPPKQTKV YLIEQVLTHV DFNFQSLFTR AFWTEELPDL WRMYRVIYAL LGKRAQTDP
|
| |