Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0962 |
Symbol | |
ID | 3707373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1062652 |
End bp | 1063617 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737470 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_343003 |
Protein GI | 77164478 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.109144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA ATGTTTGCGT TTATATGGGA GAATTATTGC AGCGTTATAA TTTTGGTGAA AGGCATCCTT TTGGCCCCCG CCGACAGGCC GCCTTTATGG ATGAATTCTA TCATCAGGAG CTTGATCAAA AAGTCGTGAT GGAGAAGCCG ATTATCGCTG CTCAAGAACA AATTGAATGG TTTCATCTCC CTGACTATGT TGAAAGAGTT AAGCACTCTT CCATAGCAGG GAGAGGCTTT CTGGATTATG GGGATACGCC TGCTTTTCCA GGTGTTTATG AAGCAGCTGC GGCGGTTGTG GGAACCGTGC TAAAGGCAGT GGATGGCATG ATGACCGGAT CTTGCCGGCG AGCTTTTATT CCAATTGCTG GTTTGCATCA CGCCCGCCGC GAAGCTGCCG CTGGTTTTTG CGTCTTTAAT GACTGCGGCG TGGCCATTGA AGCGTTACGG CGGCAGTATG GGGTGCAGCG AATAGGATAT GTGGATATCG ATGCCCATCA TGGAGATGGG GTGTTTTACG GCTTTGAGGA AGACCCGAAT GTGATTATTG TTGATCTCCA TGAAGATGGC CGTTATCTAT ATCCTGGAAC GGGATCTAAG GATGAAACGG GCACTGGCCC TGCCGTAGGC AGCAAGCTAA ATATTCCTAT GCCGCCAGGG GCCACGGATA AGAAATTTTT AGAATCTTGG GAACAAGCAG AGGCATTTCT AAAACGGGGC CAGCCAGAAT TCATTTTGTT TCAGTGCGGT GCGGATAGTT TGGCGGGCGA TCCGCTTACT CACCTTGGAT ATAGCCCTAC AGCCCATGCA CATGCCGCAA AGCGCTTATG TGCCATCGCG GAACAATATA GCTCGGGGCG CATCCTTGGC TTAGGGGGAG GAGGGTATGA TTTGGATAAC CTCGCTAAGG CGTGGTGTGC GGTCGTGCAG GCGTTTGTTA CAGCAGATGT TTTCCTATCT GATTAA
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Protein sequence | MNKNVCVYMG ELLQRYNFGE RHPFGPRRQA AFMDEFYHQE LDQKVVMEKP IIAAQEQIEW FHLPDYVERV KHSSIAGRGF LDYGDTPAFP GVYEAAAAVV GTVLKAVDGM MTGSCRRAFI PIAGLHHARR EAAAGFCVFN DCGVAIEALR RQYGVQRIGY VDIDAHHGDG VFYGFEEDPN VIIVDLHEDG RYLYPGTGSK DETGTGPAVG SKLNIPMPPG ATDKKFLESW EQAEAFLKRG QPEFILFQCG ADSLAGDPLT HLGYSPTAHA HAAKRLCAIA EQYSSGRILG LGGGGYDLDN LAKAWCAVVQ AFVTADVFLS D
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