| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0958 |
|---|
| Symbol | |
|---|
| ID | 3707369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1057489 |
|---|
| End bp | 1058013 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637737466 |
|---|
| Product | IS630 family transposase |
|---|
| Protein accession | YP_342999 |
|---|
| Protein GI | 77164474 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3335] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.569395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGGT ACACGCAGCG CTGTAATATG AAAAGAAAGA GCTTTCTTCG CCTTCGTGAA
CGCTATCGCC GCCGCGGCAA AAGATTTGTC TATCTTGATG AAAGCGGTTT TGAGCCGGAG
GTTTCCCGTC GTTACGCTTA CGCTCCAAAG GGGCGGCGTG TTTATGGTCT GATCTCCGGT
CATCGCAGAC CGCGAACCTC TTTATTGGCC GCCCGTATGG ATGAAGGCTT TGAAGCGCCG
TTTCTATTTG AGGGAACCTG TAACACGGCT GTGTTCAATG CATGGCTGGA AAAAGAGCTT
TGCCCCTTGC TCAACAGCAA CCACATTGTC ATCATGGATA ATGCTCCGTT CCACAAAGCC
GTTTCTTCAC GTGAAATCAT CAAAAAAACA GGGGCGGGAA TTTTATTCCT CCCCCCTTAT
TCCCCTGACT TTAACCCCAT AGAAAAAGAC TTCGGAAATA TCAAAAAAAT CAGAGAATAC
AACGAACATG AAACCCTTGA GAATATCGTT GCAGCGTATC AGTAA
|
|---|
| Protein sequence | MTGYTQRCNM KRKSFLRLRE RYRRRGKRFV YLDESGFEPE VSRRYAYAPK GRRVYGLISG
HRRPRTSLLA ARMDEGFEAP FLFEGTCNTA VFNAWLEKEL CPLLNSNHIV IMDNAPFHKA
VSSREIIKKT GAGILFLPPY SPDFNPIEKD FGNIKKIREY NEHETLENIV AAYQ
|
|---|
| |