Gene Noc_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0954 
Symbol 
ID3707365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1051646 
End bp1052296 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID637737462 
ProductcAMP-regulatory protein 
Protein accessionYP_342995 
Protein GI77164470 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.575012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGGA ATTTGCCCCT AGCGGGACAG GATTCCATCG AGTGTTTCCT TGAGTATTGT 
CATATTAAGA ATTTTTCTGC TAAGGTACCC ATTCTTCGCC CTGGAGACCC AGCGGATACG 
CTGTATTATA TTCGCAAGGG CTCTGCAACC GTCTATATAG AAGACGAAGA GGGCAACCAG 
CTTATCTTGG CCTACCTTAA CCAGGGAGAT TTTATCGGTG AGATGGGGTT GTTCGCCGAG 
ATTCAGAATC GGAGTGTGCT CATACAAGCC CGAACTCCCT GCCAGTTAGC GGCAATCACC 
TATGAGCGAC TGCGGTATTT ATCCCAAGGG CCGCTGGCAG AGCATTATCA TCGGATTTTG 
CTCGCTCTTG GCCGTCAACT CACTCGGCGC CTCCTGGAAA CTAATCGCAA AGTTAGCCAT 
CTAGTCTTTA TGGATGTAGC CGGCAGGGTT GCGCGAACAT TGTTAGATCT GTGCCAGCAG 
CCCGATGCCA TGACTCATCC TGACGGTATG CAGATCCGTA TTACTCGGCA GGAGATAAGC 
CGAATCGTAG GCTGCTCCCG GGAGATGGCA GGGAGGGTGC TTAAAGAGCT GCAGCAGCAG 
GGTTCGATTT GGGCTAAAGG CAAGACCATT GTGGTTTATG GCACCCGCTA A
 
Protein sequence
MGRNLPLAGQ DSIECFLEYC HIKNFSAKVP ILRPGDPADT LYYIRKGSAT VYIEDEEGNQ 
LILAYLNQGD FIGEMGLFAE IQNRSVLIQA RTPCQLAAIT YERLRYLSQG PLAEHYHRIL 
LALGRQLTRR LLETNRKVSH LVFMDVAGRV ARTLLDLCQQ PDAMTHPDGM QIRITRQEIS 
RIVGCSREMA GRVLKELQQQ GSIWAKGKTI VVYGTR