Gene Noc_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0949 
Symbol 
ID3707360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1046692 
End bp1048233 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content48% 
IMG OID637737457 
Producthypothetical protein 
Protein accessionYP_342990 
Protein GI77164465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG AAACCCATCG TTCGATTCTC GCTGATTTAG TGGACTTCAG TACACAAATG 
GATTTGGATG CCGTCATGGA GCCTGGAGAT GTGCGTCGCC GTGACCGTAG TATTGGGCGA
GAGCTGGAGC ACCTTGCAGA TAAGCCTCGG AGCCAGCTTC GCCAATGGCT ATGGCGGGTT
GCTGAGAACA AACATGATTT CCCTGGTAAT AATGCCGCTA AAACCCTTCG TTTAGTGATG
CTAGTGTTGT TTTTTTTCGG GGTGACTGTC GGCTGGATAG CAGCATTGGG GGTGTTCGCC
TATGATGGCA CGCAGCCGGT CAATGTGGTT AATGTATTGG CGGTATTTGT GGGACTCCAA
ATTCTGCTTT TACTGATGTC CGCTATTATT GCACTGCCAC GGAATATACT CCGTTTTATC
CCTGGAACAC GCTCACTGCA GGATCTTTTT GGTGTGTTGA GTCCGGGACG GTTAGCGCCT
ACAATCGCAC GGTTTTTATC GCCAGATTAC CGTTTGGCCT TTGAAGCAGC CTTGGGTCGC
CAAAAGGCGC ACCATATTAC GTATGGCCGC GTGAGGAAAT GGTTGATACT GCAATTCTCC
CAGGTATTTG CCGTGGCTTT CAATTTGGGA GCATTAATCG GCTGCCTTTA TCTAGTTACG
ATTTCTGATC TAGCCTTTGG ATGGAGTACG ACATTAACGT TTCAGGCTGA AAAATTCCAT
TGGTTAGTAC AGCAATTAGC TTGGCCGTGG CGCGATTGGC TTGGGAGCGC TGTTCCTTCC
GCCAATCTCA TTGAGGTGAC CCGGTTTTAT CGTCTTGACG AAGGCATTTT GCCAAATGCA
ATGAAGCTAG AGTCTAAAGA TGCTTCCATT CTAGGTCAGT GGTGGCAATT TTTGCTTCTA
GCAATTATCT TTTATGGTTT GCTACCACGG CTTTTTACGT TAGCTTTTGC TCGCTGGCGC
CTTAACGTTG CGTTAAACAA TGCTTTCATC CACGCACCAG GGGCTACTCA GGTTCTTGAT
CGCATGAATC ATGCGGTAGT TGAAACGGCG GCGGTAGAAC CCGAGGCAGG AGCAGTACCG
ATGCCAGAGG TGGTGCCATC TTTTCATGGC GAGAATTTCG CTGGAATTAA GGGGTACCTT
GTTAATTGGG CTGGAATTAA TTTGGATGAA AGTCAGTTAG AAAATACGTT GCGGGCGGCC
ATGGCGGTAA AGATCGATCA GGTGTTCCAT GCGGGCGGTA AAAGCCCTAT TGAGCAAGAT
CAGCGTATTA TCGGAAAGTT GCAAGCGGCG GCGGATACAA TGGCTATTGT AGTTGCTGTA
AAATCATGGG AGCCTCCTCT CTTGGAATTT TTAGATTTTT TAGAAGCACT CCGATCTGCA
TTGGGTCCAC AGCGATTAAT TACGGTGATT CCGTTAGCGC TTAACCATAG GGGTGATCTG
GTTTCTGCCG ATTCCAGTGA TTTAGATATT TGGCGGAAAA AGCTGCAGAT TCTTGGAGAT
CCCCAGCTTG ATTTTCGCCC ATTGAATTTT AAGGCAAGCT AA
 
Protein sequence
MEQETHRSIL ADLVDFSTQM DLDAVMEPGD VRRRDRSIGR ELEHLADKPR SQLRQWLWRV 
AENKHDFPGN NAAKTLRLVM LVLFFFGVTV GWIAALGVFA YDGTQPVNVV NVLAVFVGLQ
ILLLLMSAII ALPRNILRFI PGTRSLQDLF GVLSPGRLAP TIARFLSPDY RLAFEAALGR
QKAHHITYGR VRKWLILQFS QVFAVAFNLG ALIGCLYLVT ISDLAFGWST TLTFQAEKFH
WLVQQLAWPW RDWLGSAVPS ANLIEVTRFY RLDEGILPNA MKLESKDASI LGQWWQFLLL
AIIFYGLLPR LFTLAFARWR LNVALNNAFI HAPGATQVLD RMNHAVVETA AVEPEAGAVP
MPEVVPSFHG ENFAGIKGYL VNWAGINLDE SQLENTLRAA MAVKIDQVFH AGGKSPIEQD
QRIIGKLQAA ADTMAIVVAV KSWEPPLLEF LDFLEALRSA LGPQRLITVI PLALNHRGDL
VSADSSDLDI WRKKLQILGD PQLDFRPLNF KAS