Gene Noc_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0944 
Symbol 
ID3707335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1043331 
End bp1043774 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content47% 
IMG OID637737453 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_342986 
Protein GI77164461 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTGC GTCAAAGGCG GTTTGCGATG GTAATACTGG TAGTTATAGG GGTTTCCATT 
GCCACTGGAC TAGGGCTAAA AGCCTTTCAA GAAAACATTC TCTTTTTTTA CAACCCAACT
CAAATCATGG CTGGAGAAGT GCCTACGGAC ACTAGCATTA GAGTCGGAGG AGTGGTGGTT
AATGGCAGTG TAAAGCGAGA AAGCGGCAAT CTAGATGTAC AATTTGACCT CACCGATATG
GCGCAGACAG TAACCGTGGT CTATAGCGGT CTCCTCCCTG ATTTATTTCG CGAGGGACAA
GGGATCGTTG CCATGGGTAA GCTAGGACCC AACAAGGTGT TTGAAGCTAG CGAAGTGTTA
GCAAAACACG ACGAAGAATA TATGCCACCC GAGGTCGCCG ACTCGCTTGC CAAAACAAAA
GCTAATACCG AGGATAAGCT ATGA
 
Protein sequence
MTVRQRRFAM VILVVIGVSI ATGLGLKAFQ ENILFFYNPT QIMAGEVPTD TSIRVGGVVV 
NGSVKRESGN LDVQFDLTDM AQTVTVVYSG LLPDLFREGQ GIVAMGKLGP NKVFEASEVL
AKHDEEYMPP EVADSLAKTK ANTEDKL