| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0942 |
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| Symbol | |
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| ID | 3707333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1040816 |
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| End bp | 1041349 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637737451 |
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| Product | periplasmic protein thiol-disulfide oxidoreductase DsbE |
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| Protein accession | YP_342984 |
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| Protein GI | 77164459 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.107552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCGCT ATACTATTCC CTTAATTATT TTTACAGCTC TGGTCCTGTT CTTTGCTGTT
GGCCTACAGC GGGATCCCCG GCAAGTGCCA TCGCCGTTTA TTGATAAACC AGCTCCGGAG
CTGGGGGTTT CCCAGCTCAG AACGCCTAGC AAAGAAATCT ACCGCAGCGA CCTCCTTGGT
AAACCAGCTT TGATCAATGT ATGGGCCAGT TGGTGCGTTG CCTGCCGGGC AGAACATGAA
GTTCTCATGC GGTTAGCGAG AGAAACCCGG TTGCCCATCA TTGGCCTCAA CTACAAAGAT
GAACGAGGAG CTGCATTACA ATGGCTAGCT AATCTTGGCG ACCCTTATGC AGCCATTGCC
GTCGATACTG ATGGGCAGGT GGGCATCGAG TGGGGCGTTT ATGGGGTCCC TGAGTCCTTT
CTCCTCGATC CCGAAGGCGT TATTCGTTAT AAGCAGATTG GTCCCTTAAC CTGGAAGGTT
GTAGAAGATA AGCTGCTCCC TCTAATTCGG TCATTCGAAA CTCAAGGGGG TTAA
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| Protein sequence | MLRYTIPLII FTALVLFFAV GLQRDPRQVP SPFIDKPAPE LGVSQLRTPS KEIYRSDLLG
KPALINVWAS WCVACRAEHE VLMRLARETR LPIIGLNYKD ERGAALQWLA NLGDPYAAIA
VDTDGQVGIE WGVYGVPESF LLDPEGVIRY KQIGPLTWKV VEDKLLPLIR SFETQGG
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