| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0940 |
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| Symbol | |
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| ID | 3707331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1039073 |
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| End bp | 1040356 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737449 |
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| Product | cytochrome c biogenesis factor |
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| Protein accession | YP_342982 |
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| Protein GI | 77164457 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0687365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTCCT TGTCAATATT TTGGATAGCT GCAGGAATAA TGGTGCTTCT TGCACTCAGT
TTTTTGCTCC CCCCCTTATT ACGCCGCCAT AATCAACAGG TTCTTGATGA AACGACGGCG
GAGATCGCGA TTTACCGTGA ACGACTGCGG GAACTACGTG CGGAGCTTCG CAATGGTACT
CTAAACGAGG AACAATTTGC CCTAGCCCGG CGCGAGCTAG AAGAAGCTAT GGCTGCCGAT
CTTGCTACGG GCAGCACACC TTCTACTGAA CTCAAACCAA AGCGGCATTG GATCACTGCG
CTCTTTCTGC TCTTACTCAC GCCTTCACTC GCCTTCGTGG CCTATCAACA ACTTGGAGCA
AGCGATCAAG TTGCGCGTTT TTTGGCCATG GAAGAAGGTT CTCAGCAAGA AATGGATACC
ATGCGTCACG CCATGGAGGG ACTTAAAGCA CGGCTTGCGG AACACCCCGA AGATGTCAGA
GGATGGCAAT TGTTAGGACG CACCTATTTG GCTACCAATG AATTTGCGAA AGCTTCCGAA
GCATTAGGCC GTGCCTATAC TTTAGATGAC CAAAATCCCG ATGTCATTTT AGATTATGCG
GAAGCCCTCG CCGCAAGCCA AGGACGGCGC CTGCAGGGAG CGCCTTTGAA GCTGGTACAT
CGTGCGCTTG AACTCGCCCC CCAGCATCCC AAAGCATTGT GGTTGGCAGC GGTAAACGCG
CTTCAAACAA ACCAGGACGA AGAAGCAAAA TCCTACCTCC AACGACTGGC TTCTCAGCTC
CCACCAGGTA GCGAGGAAGA ACGTATGGTG CGCGCCCATT TAGCGCAATT AGCACCAGAA
ATGGCAGCTG GTGGAGCAAC AACGGAGGCT CGCGTTACTA CCGAAGCGCG AGCCCCGGCA
ACCACTACCA ACACGGAAGA AGGGGATACG CCAGCCCCTC GCATCGAGGT GAAAGTAGCG
CTTGATCCTG CCCTGCAGGG TGAGGTCTCT GAAAGCTCTA CCGTCTTCGT TTTCGCCCGT
GCAGCTAAAG GTCCTCCCAT GCCCTTAGCC GCTGCCCGGC ACCAGGTTAA AGATCTACCT
CTTACAGTGG TATTAAATGA CTCCATGGCG ATGATGCCGA GCATGAAGAT GTCGAATTTT
AGCGAGTTTC AAGTCGGGGC CCGAGTTTCT TGGTCAGGCA ATCCGGTACC TCAAAGTGGT
GATTTCGAAG GATTTGCGGA AGGTATTATT CCAGCTACCT CTTCCAAACC GGTATCGGTG
GTCATTAACC AGCGCGTACC TTAA
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| Protein sequence | MTSLSIFWIA AGIMVLLALS FLLPPLLRRH NQQVLDETTA EIAIYRERLR ELRAELRNGT
LNEEQFALAR RELEEAMAAD LATGSTPSTE LKPKRHWITA LFLLLLTPSL AFVAYQQLGA
SDQVARFLAM EEGSQQEMDT MRHAMEGLKA RLAEHPEDVR GWQLLGRTYL ATNEFAKASE
ALGRAYTLDD QNPDVILDYA EALAASQGRR LQGAPLKLVH RALELAPQHP KALWLAAVNA
LQTNQDEEAK SYLQRLASQL PPGSEEERMV RAHLAQLAPE MAAGGATTEA RVTTEARAPA
TTTNTEEGDT PAPRIEVKVA LDPALQGEVS ESSTVFVFAR AAKGPPMPLA AARHQVKDLP
LTVVLNDSMA MMPSMKMSNF SEFQVGARVS WSGNPVPQSG DFEGFAEGII PATSSKPVSV
VINQRVP
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