Gene Noc_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0927 
Symbol 
ID3707317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1023885 
End bp1025126 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content49% 
IMG OID637737435 
Productaspartate kinase 
Protein accessionYP_342969 
Protein GI77164444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA TTGTTCAAAA ATTTGGTGGG ACTTCCGTGG GGACTCTCGA ACGTATCGAG 
GCGATTGCGG ATAAACTTGT GGCGTTTCAG CGGAGGGGAG ATAGTCTTGT GGCCGTAGTA
TCAGCCATGA GCGGCGAGAC TAATCGCCTG TTAGCGTTGG CCCATGAAAT ACACTCCCAG
CCTAATCCCC GGGAATTAGA TGTCCTGCTT TCTACGGGCG AGCAGGTAAC CATCGCTTTA
CTGAGTATTG CTATAGAGAA ACGCGGGATT CCAGCTCGCT CTTACACCGG ATCTCAGGTG
TATATCCGTA CGGACAGCGC CCATAATAAA GCCCGTATTC AGGAGATTGA TGCCAAACGT
ATCCATGATG ACCTGAGACA AGGGCGAATT GTGGTTGTTG CTGGTTTTCA AGGGGCAGAC
GAGAAAGGGA ATATTACCAC TTTGGGGCGG GGTGGTTCCG ATACGACTGC TGTGGCGCTG
ACTGCAGCAC TGGAAGCAGG CGAGTGCCAA ATTTATACGG ATGTCGATGG CGTTTACACG
ACTGATCCGC GAGTAGTTCC AGAGGCCCGG CGGTTAGCTC GCCTGACCTA TGAAGAAATG
CTTGAATTGG CGAGCCTCGG CGCCAAAGTT CTACAAATTC GGGCGGTTGA GTTTGCCAGC
AAGCATCACG TGCCCTTGAG AGTGTTGTCA TCATTTGAAA AAGGGGAGGG TACCCTGATT
ACATCTGAGG TAGAGGGAAT GGAAGAGCCA CTAATTTCTG GAATCGCTTT TAATATTGAT
GAAGCTAAGC TAACCATATT AGGTGTGCCT GACAAGCCCG GTGTTGCCTA TCATATTCTT
GGCCCTGTTG CCGATGCTAA TATTGGGGTA GATATGATTA TTCAAAATGT GGGTAGAGAT
GGCACGACGG ATTTTACTTT TACCGTACAT CGGAATGATT ATTTGAAGGC CCTTGAGATT
TTACGCGAAT CCGCCTCGAC TCTAGGTGCG CGGGAGGTCC GGGGAGATGA TAAAATCGCG
AAAATATCAG TAGTTGGCGT CGGTATGCGT TCCCATGCAG GCATTGCCAG CACTATGTTC
CATACGCTAG CACAAGAAGG AATCAATATT CAGACTATTT CCACTTCGGA GATCAAAATC
TCGGTGGTTA TAGAAGAGAA ATACTTGGAA CTCGGAGTAC GGGCTTTACA CTCGGCGTTT
GAATTAGAAA AAGCGCCGAG TAGAATATCC TCCTCTCTTT AA
 
Protein sequence
MTLIVQKFGG TSVGTLERIE AIADKLVAFQ RRGDSLVAVV SAMSGETNRL LALAHEIHSQ 
PNPRELDVLL STGEQVTIAL LSIAIEKRGI PARSYTGSQV YIRTDSAHNK ARIQEIDAKR
IHDDLRQGRI VVVAGFQGAD EKGNITTLGR GGSDTTAVAL TAALEAGECQ IYTDVDGVYT
TDPRVVPEAR RLARLTYEEM LELASLGAKV LQIRAVEFAS KHHVPLRVLS SFEKGEGTLI
TSEVEGMEEP LISGIAFNID EAKLTILGVP DKPGVAYHIL GPVADANIGV DMIIQNVGRD
GTTDFTFTVH RNDYLKALEI LRESASTLGA REVRGDDKIA KISVVGVGMR SHAGIASTMF
HTLAQEGINI QTISTSEIKI SVVIEEKYLE LGVRALHSAF ELEKAPSRIS SSL