| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0911 |
|---|
| Symbol | |
|---|
| ID | 3707296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 997758 |
|---|
| End bp | 998981 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637737414 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_342953 |
|---|
| Protein GI | 77164428 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000280403 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCAC CGCAGCAGAT TCTCGATGAG ATTCGGCGGG GAACCGAAGA GGTTTTACTT
GAAGAAGAAC TTAAGCTAAG ACTGGAGCAA GGTAGAATCT TGCGTGTCAA AGCGGGCTTT
GACCCTACTG CACCAGAGCT GCATTTAGGA CATACGGTGT TGCTTAATAA ACTCCGTCAA
TTCCAGGAAT TTGGGCATGA AGTTTTGTTT TTGATTGGCG ATTTCACCGG AATGATTGGT
GATCCTTCAG GAAAAAATGT AACGCGCCAG CCCCTTACTC GTGATAAAAT CTTGGAGAAT
GCCCGCACCT ACGAAGAACA AATCTTTAGG GTACTCGATC CGGAAAAGAC TCTGGTGGTT
TTTAATTCTA GCTGGATGAG TGGAATGACG GCTGCTGATT TAGTACGACT TTCCTCACAT
TATACAGTAG CTCGCATGCT TGAGCGTGAC GATTTCTACA AACGCTACCA AGGTAAGCGG
CCGATTGCCA TCCATGAATT TCTCTATCCT CTACTACAAG GTTATGATTC AGTGGCGTTA
AAGGCTGATG TAGAGCTAGG CGGCACAGAC CAAAAATTTA ACCTACTAGT AGGCCGCGAT
CTACAGAAAG CTTATGGCCA AGAGCAGCAA ATTATCATTA CCATGCCTAT TTTAGAAGGG
CTGGATGGGG TACAGAAGAT GTCCAAATCT CTTGGGAATT ATATAGGTAT CAGCGAACCA
CCAAGGGAGA TATTCGGTAA GCTCATGTCG ATTTCTGACG ATCTAATGTG GCGTTACCTT
GAACTATTGA GTTCTCGACC AATGAGCGAG ATTAGCCGGT GGAAGAAGGA AGTTGAGCAG
GGAGCCAATC CTCGGGATAT TAAAGTAAAG CTTGCGAAAG AGATCGTTGC TCGCTTCCAT
GATGATAGTA TGGCTGAACA AGTCCATGAG GCGTTTGTGG CCCAATTTCG CCGGGGTGCT
ATGCCAGAGG ATATTCCCGA AATTCTTATA GTTGCGGGGA GAGAGGGGAT AGCTATTGCT
AGGCTGTTAA AAGAATCGGC CCTGACTGCA AGCACCTCGG AATCCCTGCG CTTGATTAAA
CAGGGAGCTG TTAAAATAGA TGGTCAGCGC CTTGGAAACC AATCCCTCCA AATACTACCA
GGCATTACTC ACGTCGTGCA GGTAGGTAAA CGGCGTTTCG CCCGAGTATC CATACGGCTT
TCTGAGGACC AATGTAGAAA ATAA
|
|---|
| Protein sequence | MVSPQQILDE IRRGTEEVLL EEELKLRLEQ GRILRVKAGF DPTAPELHLG HTVLLNKLRQ
FQEFGHEVLF LIGDFTGMIG DPSGKNVTRQ PLTRDKILEN ARTYEEQIFR VLDPEKTLVV
FNSSWMSGMT AADLVRLSSH YTVARMLERD DFYKRYQGKR PIAIHEFLYP LLQGYDSVAL
KADVELGGTD QKFNLLVGRD LQKAYGQEQQ IIITMPILEG LDGVQKMSKS LGNYIGISEP
PREIFGKLMS ISDDLMWRYL ELLSSRPMSE ISRWKKEVEQ GANPRDIKVK LAKEIVARFH
DDSMAEQVHE AFVAQFRRGA MPEDIPEILI VAGREGIAIA RLLKESALTA STSESLRLIK
QGAVKIDGQR LGNQSLQILP GITHVVQVGK RRFARVSIRL SEDQCRK
|
|---|
| |