| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0901 |
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| Symbol | |
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| ID | 3707228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 982409 |
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| End bp | 983149 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637737404 |
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| Product | tfp pilus assembly protein PilF |
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| Protein accession | YP_342943 |
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| Protein GI | 77164418 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTACTTG GCTTCGCGGG TTGTGCCTCA ATACTCTCCT CTCAAGAGCA GGATATACCC
TCGATTGACA AGGAGAAGGC AGCCAAGATT AATGTTCAGT TAGGGGTAGA GTATTTTAAG
CAAGGCGAGT TGGAGCAGGC GTTAAAAAAG CTAGAGCGCG CTATCCAGCA AGACCCGAAG
CTTCCTAGTG CCTACAATGC CTTGGCTCTT CTCAAGCAAC GCTTAGGCCA GGCGGAGGAG
GCAGAAAAAT ATTTTCAGCG GGCTATAAAG TTGGATCCGG AGTATTCGGA AGCTCAAAAC
AATTACGGAG TTTTTCTTTA TAACCAGGGG CATTATGGAG ATGCGGAGGC ACGCTTCTTG
GAAGCCGTTA AGAATCCTTT ATATGGTACA CCGGAACTAG CCTACGAGAA TGCAGGAATG
GCTGCCCAAA AGCAAGTGGA ATTCGATAAA GCGGAGAGAT ATTATCGCAA GGCCTTGCAG
CTTGAGCCAA GGCTACCCAA GTCTTTATAC CATATGGCTG AAATAAGTTT TGAGAAAGGC
CATTACCAAC GAGCGCAGGA GTATTTGCAA CGTTATCGTG TAGGGGCTCG GCATACCCCA
AAATCTTTAT GGCTTGGCAT CAGAATTGAG CGTGAATTGG GCAATGAGGA TACGGTGTCT
AGCTATGCTT TATTGTTGAG GCGGAATTTT CCCGATTCCC CAGAAGCTAA GCTCCTGCAA
AAAAGCTTGG ATAGACAGTA G
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| Protein sequence | MLLGFAGCAS ILSSQEQDIP SIDKEKAAKI NVQLGVEYFK QGELEQALKK LERAIQQDPK
LPSAYNALAL LKQRLGQAEE AEKYFQRAIK LDPEYSEAQN NYGVFLYNQG HYGDAEARFL
EAVKNPLYGT PELAYENAGM AAQKQVEFDK AERYYRKALQ LEPRLPKSLY HMAEISFEKG
HYQRAQEYLQ RYRVGARHTP KSLWLGIRIE RELGNEDTVS SYALLLRRNF PDSPEAKLLQ
KSLDRQ
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