| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0897 |
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| Symbol | |
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| ID | 3707224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 978190 |
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| End bp | 979914 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637737400 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_342939 |
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| Protein GI | 77164414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCT CTCAATATTT GCTTACTACC ACCCGTGAAA CTCCAGCTGA CGCCGAGATA
ATCAGCCATC AGTTGATGCT CAGGGGAAGT TTTATCCGTC GGCTTGCAGC AGGCCTCTAT
ACCTGGCTCC CTCTGGGTTT ACGCGTACTA CGCAAGGTTG AAAACATTAT CCGCGAAGAA
ATGGATAAGG CTGGCGCCCA GGAAGTATTA ATGCCGGCAG TACAGCCTGC TGAGTTATGG
CGAGAAACAG GGCGCTGGGA GCAATACGGG CCAGAGTTAT TGCGTTTTAC TGATCGTCAT
CAACGATTTT TCTGCTTTGG TCCTACTCAC GAGGAAGTAA TTACTGATCT CATCCGCCGT
GAGATACGGA GTTATAAACA GCTGCCCGCC AATTTTTACC AAATACAGTT GAAATTCAGG
GATGAAATTC GGCCCCGGTT TGGAGTCATG CGGTCACGGG AATTTTTAAT GAAGGATGCC
TACTCTTTTC ATCCAGACCA AACATCATTA GCTCAAACCT ATAACCAAAT GTATGAAACC
TATTCTCGCA TCTTTGATCG AATCGGGTTA ACCTTTCGAG CAGTACAAGC TGATACTGGG
GCCATTGGCG GCAAAACATC CCATGAATTT CATGTGCTTG CTGCCTCTGG TGAAGATGCC
ATTGCCTTCT CGGATAAAAG CACCTATGCT GCCAATGTAG AATTAGCTGC TGCCCTTCCC
CCTACAGATA AACCTGCCTC GCCAAAAGAA ACGCTTTCTT TAATAGAAAC ACCAGGGCAG
TGCACTATTA AAGAAATAAG CCAATTCCTT AACATTCCAT CCTCGCGCTG CATCAAAACC
CTGTTAGTGC AAGGCAGCGA GGGAGAATTA GTAGCTCTCG CGCTACGGGG TGATCATGAA
CTCAATGCGG TGAAAGCGCA AAAGCTTCCC CAAGTGGCCA ACCCTCTTCA GTTTGCCACA
CCCGAACAGG TATGGAAAAC TTGTAATGCA TCTATCGGCT CCATAGGCCC CATGGGTCTT
GCGATCCCCC TTATTGCAGA TCACGGCGCG GTCCAGTTAA CAGATTTCGC CTGTGGTGCC
AATATGGAAG GTAAACACTT CACTGGAGTT AATTGGGGAC GTGATTTACC TGAACCCAGC
ACGGCTGATA TCCGCAATGT GGTCGATGGC GATCCAAGCC CCGATGGAGA GGGAACCTTA
TCCATTGCCC GGGGTATCGA GGTAGGCCAT ATTTTCCAGC TTGGCGAAAA ATATAGCCAG
GCTATGAATG CTACGGTGCT AGATGAAACA GGTCGAGCTA TCAGCTTGGC AATGGGCTGT
TATGGTATTG GCGTCTCTCG CGTGGTAGCT GCCGCTATTG AGCAAAATCA TGACGAGCAT
GGCATTATCT GGCCTGCGTC CATTGCCCCC TTCCAGCTAG CGCTTGTCCC TATTAACGCG
CATAAATCAG CACGAGTAAA GGAAATGAGT GACCGGCTCT ATACAGAGCT ACAAGCAGCA
GGATTTGAAG TATTGCTCGA TGACCGGCAA TTACGCCCCG GCGTAATATT TGCTGATATG
GATCTAATCG GTATTCCCTA TCGTTTAGTG ATCAGCGAAC GGGGATTAGA AAATAATACT
GTAGAATACA AGCGACGTCA GGATGGAAAA ACCTGCGCTA TTCAGCTAGA TAACTTTATT
TCCGGACTCA AGGCCGAATT AAAAGCTCCG ATATCTAGGA GGTGA
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| Protein sequence | MRTSQYLLTT TRETPADAEI ISHQLMLRGS FIRRLAAGLY TWLPLGLRVL RKVENIIREE
MDKAGAQEVL MPAVQPAELW RETGRWEQYG PELLRFTDRH QRFFCFGPTH EEVITDLIRR
EIRSYKQLPA NFYQIQLKFR DEIRPRFGVM RSREFLMKDA YSFHPDQTSL AQTYNQMYET
YSRIFDRIGL TFRAVQADTG AIGGKTSHEF HVLAASGEDA IAFSDKSTYA ANVELAAALP
PTDKPASPKE TLSLIETPGQ CTIKEISQFL NIPSSRCIKT LLVQGSEGEL VALALRGDHE
LNAVKAQKLP QVANPLQFAT PEQVWKTCNA SIGSIGPMGL AIPLIADHGA VQLTDFACGA
NMEGKHFTGV NWGRDLPEPS TADIRNVVDG DPSPDGEGTL SIARGIEVGH IFQLGEKYSQ
AMNATVLDET GRAISLAMGC YGIGVSRVVA AAIEQNHDEH GIIWPASIAP FQLALVPINA
HKSARVKEMS DRLYTELQAA GFEVLLDDRQ LRPGVIFADM DLIGIPYRLV ISERGLENNT
VEYKRRQDGK TCAIQLDNFI SGLKAELKAP ISRR
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