| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0896 |
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| Symbol | |
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| ID | 3707223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 977618 |
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| End bp | 978190 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637737399 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_342938 |
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| Protein GI | 77164413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.671617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCCCC TAGATTATAG TCAGTTATTT ATGTTAATTT TTTTTTATAC CCTGCTGGGT
ATAACAGCCG CTGCTGAACT ACCAGAACTA GATAGACAGA TAAGGCACCA GCTCGTCTCC
GCCGCTGGAA AAAAGGACGG TTTTAAAGAC CGGTTTCATG CCCAAGTATG GCTACTGGAT
ATGGAATACC GCTTTAGAAC TCGTATTCCC CAACTCAAAA AGCGCCTAGC AATCCTGCGT
TTAGTCCACC GTGAGGCGGT CCAAGCAAAT CTAGCCCCTG AGCTCGTACT TGCCATCATC
GAGGTGGAAA GTAATTTTAA CCGTTTTGCT ATTTCTGAAG CTGGCGCCCG CGGCCTTATG
CAAATTATGC CTTTCTGGCT CAAAGAAATT GGCCATAAAG AAGATAACCT CATGGACATT
GCAACCAATC TGCGTTTTGG TTGTACGATC CTTCGACGCT ACATTAACCG TGAAAAAGGC
GATCTTACCC GCGCCCTAGC CCGCTATAAC GGCAGTATCG GAAAAACGTG GTATCCAAAT
AGAGTCTATA AAGCCCTTCG CCATTGGCAG TAA
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| Protein sequence | MKPLDYSQLF MLIFFYTLLG ITAAAELPEL DRQIRHQLVS AAGKKDGFKD RFHAQVWLLD
MEYRFRTRIP QLKKRLAILR LVHREAVQAN LAPELVLAII EVESNFNRFA ISEAGARGLM
QIMPFWLKEI GHKEDNLMDI ATNLRFGCTI LRRYINREKG DLTRALARYN GSIGKTWYPN
RVYKALRHWQ
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