Gene Noc_0895 details

Gene Information

• Locus tag: Noc_0895
• ID: 3707222
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 976860
• End bp: 977519
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637737398
• Product: NapC/NirT cytochrome c-like
• Protein accession: YP_342937
• Protein GI: 77164412
• COG category: [C] Energy production and conversion
• COG ID: [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.356443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTATCTA AATTAAAACA ATGGTGGCAA GCCATTGTTG AGTATTTTAA AGTTCATTGG 
CGCCCGGTTG CGGTCGGAGC GGGGGGGCTA TTTGCTCTAA TTGTTATCGT TTTTGGAGGC 
GAGGCGGCGT TATCAACGAC CACCTTTTGC ACTAGTTGTC ATTCGATGTC TTATCCGTAT 
GAGGAATTGC AAGAGTCCGC TCATTATGGC AGGTTTGGTT TGCAACCCCA ATGTAAGGAT 
TGCCATATTC CTCAGGGGTT AGGGAACTTC CACAAGGCAG TTTATACTCA TGTAGTGGAT 
GGGGCGCGAG AGCTTTATTT AGAACTTGTT AACGATTATT CTACACTTGA AAAATTTAAT 
GAGCGCCGGC AAGAAATGGC CCATCATGCC CGCATGAATC TAAAGGGATG GGATAGCGTG 
ACCTGCCGGG ATTGCCATCA GGATCCACAA CCAGCAGCTA AATCTGGCCA GCGGGCTCAC 
AAAAAGCTTG ATGACGGCTG GACCTGCATT GATTGCCATC AAAACCTTGT GCATGCTCCT 
GTGGAGCATA CCGATCTTGA TGCAAGTGAG CGGCGTGGCG AGATGGTCAT CATGGATGAG 
ATAGATTGGA CAGACCGTAA CCCGCTAGCC GGAGTGGAGA CTCGTTCGAT AAGGAATTAA 

 

Protein sequence

MLSKLKQWWQ AIVEYFKVHW RPVAVGAGGL FALIVIVFGG EAALSTTTFC TSCHSMSYPY 
EELQESAHYG RFGLQPQCKD CHIPQGLGNF HKAVYTHVVD GARELYLELV NDYSTLEKFN 
ERRQEMAHHA RMNLKGWDSV TCRDCHQDPQ PAAKSGQRAH KKLDDGWTCI DCHQNLVHAP 
VEHTDLDASE RRGEMVIMDE IDWTDRNPLA GVETRSIRN