Gene Noc_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0884 
Symbol 
ID3707211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp966568 
End bp967059 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content49% 
IMG OID637737387 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 
Protein accessionYP_342926 
Protein GI77164401 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.100014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGGG CTTATATTGG GCTAGGAAGC AACCTTAATC AGCCCCGTTG GCAAGTTGCT 
CAAGCCCTAT CTGAACTTGC CGCCTTGCCC CAAACTAGGC GTGTGGCGCA TTCTAAATTT 
TACCAGAGTG TTCCCCAAGG TCCCCAGGAT CAACCCGATT ATATTAATGC CGTTGCAGCC 
TTAGATACGG TACTGGAGCC CTATGATTTG CTTGCCAAGC TGCAAGCTAT AGAGGAAGGC 
CATCATCGTG TTCGGAAGCG CTATTGGGGA GAGCGCACTT TAGATCTTGA TCTGCTTTTG 
TATGGCGATT TAGAAATTAC TACGGAGAGA CTAACGATAC CCCATTCTAG ATTGCATGAG 
CGAGCATTTG TACTTTATCC TCTAGCGGAA ATAGCCCCCC ATGCGATAAT ACCGGGAAGA 
GGAAGAGCTG CCGCTCTCGC CTATGGCTGT TCACCCTGGG GTTTACAATG CTTGGAGAAC 
GATGGCATTT AG
 
Protein sequence
MIRAYIGLGS NLNQPRWQVA QALSELAALP QTRRVAHSKF YQSVPQGPQD QPDYINAVAA 
LDTVLEPYDL LAKLQAIEEG HHRVRKRYWG ERTLDLDLLL YGDLEITTER LTIPHSRLHE 
RAFVLYPLAE IAPHAIIPGR GRAAALAYGC SPWGLQCLEN DGI