Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0881 |
Symbol | |
ID | 3707187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 962661 |
End bp | 963818 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737384 |
Product | hypothetical protein |
Protein accession | YP_342924 |
Protein GI | 77164399 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATGATC GAATAGCGCG GCGGATGGAA GACATTAAAC CATTCCAGGT AATGGCGTTA TTAGCGCGGG CGAGGGAGCT AGAGGCTCAG GGGCGTAGTA TTGTCCATAT GGAAATCGGT GAACCCGATT TCATTACGCC CCAGCCTATC GTGGAGGCCG GAATTGCTGC CTTGCGCGCA GGACGGATTC ACTATACTCC GGCGGTTGGA TTACCCGCCT TGCGAGAAGC TATTGCAAAT TGGTATAGCA AGGATGCGGG AATTACGGTA CCGCCGGAAC GCATTATTGT AACGCCAGGT GCTTCCGGAG CTTTATTGCT GGCTATGGCT GCCTTACTCA ATCCGGGAGA GGCAGTGCTT ATGGCCGATC CAGGTTATCC GTGCAATCGC TACTTTGCTC GGCTTTTAGA AGGGAAAATC ATAGGTATTC CAGTAACCGA AGCAAGCGCC TATCAGCTTA GTTCGAGCCA TATCGATTCC TACTGGACTC CGGAAACCCG GGCTGCGTTG GTTGCCTCAC CGGCTAACCC GACGGGGACC CTCCTTTCCC AAACGTCACT GGCAGCTTTA ATCGAGAGCG TTGAGTCCCG GATGGGGACT CTTATCGTTG ATGAAATTTA TCATGGCTTG GTTTATGAAG GCAGAGCAGC TACTGCCCTC GGACTTTCGG AACATGCATT GGTAATCAAC AGTTTCTCAA AGTACTTCGG GATGACAGGA TGGCGATTAG GATGGTTAGT CGTGCCCAAA AACTTTATTG GGGCCGCTGA GAAATTAGCC CAGAACCTCT TTCTTGCTGC TTCTACACCA GCTCAATATG CTGCCCTTGC CGCTTTTAAG CTTGAAACGC TGAAGGTTTT GGAGACGCGC CGGGTGGAAT TCCAGCGACG ACGAGATTTC CTTTTGCCTG GATTGAGGAG CCTTGGTTTC CATGTTCCAG TAACTCCGCA AGGGGCATTT TATATTTATG CGGATTGCTC TCAGTTTTCG GCGGACAGTT TCGCTTTTGC CCGGGAACTG CTGGAGGAAA TCGGAGTTGC CGTAACTCCA GGTGTAGATT TTGGTTGCAA TGCCTCGCGG CAGCACTTGC GTTTTGCTTA TACCACCTCA ATGGAGCAGT TGCAGGAAGG GCTCAAACGC CTCCAAGCTT ATTTATAA
|
Protein sequence | MNDRIARRME DIKPFQVMAL LARARELEAQ GRSIVHMEIG EPDFITPQPI VEAGIAALRA GRIHYTPAVG LPALREAIAN WYSKDAGITV PPERIIVTPG ASGALLLAMA ALLNPGEAVL MADPGYPCNR YFARLLEGKI IGIPVTEASA YQLSSSHIDS YWTPETRAAL VASPANPTGT LLSQTSLAAL IESVESRMGT LIVDEIYHGL VYEGRAATAL GLSEHALVIN SFSKYFGMTG WRLGWLVVPK NFIGAAEKLA QNLFLAASTP AQYAALAAFK LETLKVLETR RVEFQRRRDF LLPGLRSLGF HVPVTPQGAF YIYADCSQFS ADSFAFAREL LEEIGVAVTP GVDFGCNASR QHLRFAYTTS MEQLQEGLKR LQAYL
|
| |