Gene Noc_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0866 
Symbol 
ID3707171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp949572 
End bp950144 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content52% 
IMG OID637737368 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_342909 
Protein GI77164384 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.324538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAG TCATTTCTGG GAAGTGGTGG ATAGACGCGG ATAGCGGCTG GCTTGCCAAT 
GCCCGTCGTG TGGTCTCGCC TAACCAGGAT GAGCGGCCAC CAGGCATGGC TGCGGAATGG
GTAGTGATCC ATGGTATTAG CTTACCTCCT GGAGAGTTCG GAGGACCATG GATTGATGCC
CTCTTTACCA ACCGTCTTGA AGTGGCTGCT CATCCCTACT TTGATGGGAT TCGCGGGCTG
CGGGTCTCCG CTCATATTCT CATTGCACGG GATGGCACTT TAACCCAATA TGTGCCCTTT
CATAAACGAG CTTGGCATGC GGGTGAGTCT ATGCTTAAGG GGCGCTGCCG ATGTAATGAT
TTTACTATTG GGGTAGAATT GGAGGGTGCC GATACCGTAC CCTATGAAAA GATGCAATAT
CAGGTGTTGG CGAATCTGAT AAATGTTTTG GCCGGAGCTT ATCCGGCCTT TTCCAAGGAA
CGGATCGTGG GGCATAGTGA TATCGCGCCC GGCCGTAAAA CCGATCCGGG TCCTGCTTTT
GAGTGGATGC GGCTCAAATC TTTACTTGCT TAG
 
Protein sequence
MGKVISGKWW IDADSGWLAN ARRVVSPNQD ERPPGMAAEW VVIHGISLPP GEFGGPWIDA 
LFTNRLEVAA HPYFDGIRGL RVSAHILIAR DGTLTQYVPF HKRAWHAGES MLKGRCRCND
FTIGVELEGA DTVPYEKMQY QVLANLINVL AGAYPAFSKE RIVGHSDIAP GRKTDPGPAF
EWMRLKSLLA