Gene Noc_0855 details

Gene Information

• Locus tag: Noc_0855
• ID: 3707160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 936202
• End bp: 936678
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637737357
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_342898
• Protein GI: 77164373
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.686108
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTG GGCATGGTTT TGACGCCCAT CGCTTTGGTT CGACGGGAAA GTTGATTTTG 
GGGGGTGTAG AAATTCCCCA TGAGCAAGGT TTAATCGCCC ATTCTGATGG TGATGTGGTG 
ATTCATGCCC TGTGCGATGC TTTATTGGGC GGTGCGGCTT TGGGCGATAT CGGGCGCCAT 
TTTCCGGATA CTAGCGCTGA GTTTAAGAAT GCGGACAGCC AAAAATTGCT TCATCGGGTG 
ATGGTCTTGT TGAAGGAACA CGGGTTTAAG GTAAGTAACG GGGATATGAC GATTATAGCG 
CAGATTCCCA AGTTGGCCCC TTATCTTCCA GCCATGCGTG AAACCCTGGC TCTTGCGCTT 
GGATTACCTC TGCAGCGTTT CAATATTAAG GCGACCACTA CGGAAAGGAT GGGCTATATT 
GGGCGGGCGG AAGGTATCGC GGCCCATGCG GTAGTATTAT TGCTGGAAGA ACAATAA 

 

Protein sequence

MRIGHGFDAH RFGSTGKLIL GGVEIPHEQG LIAHSDGDVV IHALCDALLG GAALGDIGRH 
FPDTSAEFKN ADSQKLLHRV MVLLKEHGFK VSNGDMTIIA QIPKLAPYLP AMRETLALAL 
GLPLQRFNIK ATTTERMGYI GRAEGIAAHA VVLLLEEQ