| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0851 |
|---|
| Symbol | |
|---|
| ID | 3707156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 933061 |
|---|
| End bp | 933903 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637737353 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_342894 |
|---|
| Protein GI | 77164369 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT GCGGGTTTGA GGTGGGTTTA GAGCGGGCCT TGTTTCTGAT TGCGGGCCCC
TGTGTGATTG AAAGTGAACA GCTGGCCTTG GATACGGCGG GCAGGCTGAA GGAAATGACA
GAACGTCTAG GCATTCCCTT TATTTATAAA TCTTCATTTG ATAAAGCCAA TCGAACTGCG
GTGGAAAGTT TTCGCGGGCT TGGCATGGAA GCAGGTTTAG GTATTCTGGA GAAGGTTAAA
GCGACCCTTG GGGTACCGGT GTTGACTGAT GTTCATGAGG ATACGCCGCT ACAGGAGGTC
GCGGCAGTAG TGGATGTGCT GCAAACTCCA GCTTTTCTCT GTCGGCAGAC CAATTTTATT
CAGAACGTTG CCCGCCAGGG ACGGCCTGTC AACATCAAAA AAGGGCAGTT TTTGGCCCCT
TGGGATATGA AGCATGTGGT GGAAAAAGCC AGGGCGGTTG GCAATCAGCA AATTATGGTT
TGTGAGCGAG GTGTTTCATT TGGCTACAAT ACCTTGGTTT CGGACATGCG CAGTCTGGCA
GTTATGCGGG ATACAGGCTG CCCTGTAGTT TTTGACGCCA CCCATTCCGT TCAGCAACCC
GGAGGAAAAG GAGGATGTTC TGGCGGGCAG CGGGAATGGG TGCCGGTACT TGCCCGTGCG
GCTGTGGCGG CGGGGGTGGC AGGAGTGTTT ATGGAAACCC ATCCAGATCC GGAGCGGGCC
TTAAGCGATG GTCCTAATGC TTGGCCGTTA GGGGCGATGG AAAAATTATT GGAGACTTTA
AGTACCATCG ATAAGACGGT GAAAACGGAC GGTTTTCTCG AAGCGGAATA CCGCTTAAAT
TAA
|
|---|
| Protein sequence | MELCGFEVGL ERALFLIAGP CVIESEQLAL DTAGRLKEMT ERLGIPFIYK SSFDKANRTA
VESFRGLGME AGLGILEKVK ATLGVPVLTD VHEDTPLQEV AAVVDVLQTP AFLCRQTNFI
QNVARQGRPV NIKKGQFLAP WDMKHVVEKA RAVGNQQIMV CERGVSFGYN TLVSDMRSLA
VMRDTGCPVV FDATHSVQQP GGKGGCSGGQ REWVPVLARA AVAAGVAGVF METHPDPERA
LSDGPNAWPL GAMEKLLETL STIDKTVKTD GFLEAEYRLN
|
|---|
| |