| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0849 |
|---|
| Symbol | |
|---|
| ID | 3707154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 929984 |
|---|
| End bp | 931312 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737351 |
|---|
| Product | tRNA(Ile)-lysidine synthase |
|---|
| Protein accession | YP_342892 |
|---|
| Protein GI | 77164367 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTT CAGCCGGCCA TTTGTTTGAA ATTCTCCAAC AATTATCTTC TTGTCACGGT
TACCGGGTAG CCTACAGCGG CGGGCTGGAT TCTCAAGTAT TACTCTACAG CTTGGTGCAG
TTGAGTCCTA AATTGCCGGG AAGCCTTATT AGCGCTATTC ACATAGATCA CGGGCTGCAC
CCCCGCTCTG AAGAATGGTC TCTCCATTGC CGTGAAAGCT GCGCCGCATT AGGGGTTGGG
TATGAGGAGG TCAAGGTAAA TGCCCATCCG AGAAAAGGAG AAAGCCCCGA GGCAGCTGCC
CGTGAGGCCC GCTATGGCGC GCTTCGGCGC CGGATAGCCC TAGGAGAATG CCTGCTAACC
GCCCAGCATC AGGATGATCA AGTCGAAACC CTCTTGCTGC AACTTCTGCG AGGGGGAGGA
CCTGCTGGGT TGGCGGCCAT GGCAAAAGCG GCGCCGTTTG GGCAGGGCCG ATTACTGCGT
CCTTTACTTT CTTTCTCCCG ATCTGAATTA AAGATCTATG CGGAACAGGA GGGCTTAGTT
TGGGTTGAAG ATCCCAGTAA TTTTGATCTC GAGTTTGATC GTAATTACCT GCGCCATAAA
ATTTTACCCT TACTATGGCA GCGTTGGCCA GGGTTAGGCC GGACCTTGTC TCGGGCCGCA
TTTCATCAGG CTGACGCCGC TTGGTTGCTC GACCAACAGG CCCAACGGGA ACTGGTTGCA
GTTAGCGCCG GTAAACAGGG ACTTTCAGTG CAGGCGCTCC AAGCGTTAGC GCCGCCCCAG
CGGCGCAATT CCCTGCGCTA TTGGTTTAAA CAGATGCAAC TGCCTCTTCC TGATAGCATT
CATTTACAGC GTATTCTGGA GGAAGTTTTG CCTGCTCCCG AGGATGCCCA GCCTCTGGTT
GCCTGGCCGG GAGCAGAGCT TCGGCGTTAC CGCGACCGCC TATATGCCCA GAAACCTCTG
CCTCCCCATG ATGCGGCGGA GATTTTGGTT TGGGAGGGAG TCGAGCCTTT GGTATTGCCT
GCTGGGGTTG GCGGGGTATT GGTTCCTAAA CGGACCCGAG GGCTGGGTTT GGATGCAATG
CGGCTGCGGC AAAATCCCAT GACCGTTCGC TTCCGCCAGG GTGGGGAACG TATTCGCTTG
GTAGAGCGAG GTTATCGCCG CTCCCTGAAA AAAATTCTCC AAGAGCGGGG GATTCCCCCC
TGGCAACGGA CCCGTATTCC GATGGTCTAT GTGGGCGATA AGCTTGCCTT TGTGGCTGGA
ATTGGCGTTG ATTGGGATTT TGCTGCCGCG CCTGGGGAAG CAGGAATCGT TATCGAATGG
ATTCTTTAA
|
|---|
| Protein sequence | MGFSAGHLFE ILQQLSSCHG YRVAYSGGLD SQVLLYSLVQ LSPKLPGSLI SAIHIDHGLH
PRSEEWSLHC RESCAALGVG YEEVKVNAHP RKGESPEAAA REARYGALRR RIALGECLLT
AQHQDDQVET LLLQLLRGGG PAGLAAMAKA APFGQGRLLR PLLSFSRSEL KIYAEQEGLV
WVEDPSNFDL EFDRNYLRHK ILPLLWQRWP GLGRTLSRAA FHQADAAWLL DQQAQRELVA
VSAGKQGLSV QALQALAPPQ RRNSLRYWFK QMQLPLPDSI HLQRILEEVL PAPEDAQPLV
AWPGAELRRY RDRLYAQKPL PPHDAAEILV WEGVEPLVLP AGVGGVLVPK RTRGLGLDAM
RLRQNPMTVR FRQGGERIRL VERGYRRSLK KILQERGIPP WQRTRIPMVY VGDKLAFVAG
IGVDWDFAAA PGEAGIVIEW IL
|
|---|
| |