Gene Noc_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0840 
Symbol 
ID3707145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp917377 
End bp918291 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID637737342 
Productperiplasmic binding protein 
Protein accessionYP_342883 
Protein GI77164358 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.62088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TAGCACTATG GGCTTTATTC ATTCTGGGGG GTATTACGGG TGCTCATGGC 
AATGAATCTA AATATTTAGA AAATAATAGA AAAGTTAAGC CTGAGCCGGA AAAATATCAT
CGCATTATCT CCCTTGCGCC CAGCATTACG GAAACTTTGT TTGCGTTAGG GCTGGAAGAG
CAAGTGGTGG GGGTCACCCG CTACTGCGAT TATCCACCAA AAGCGCTGAC AAAACCAAAG
GTAGGCGGAT ACTTGGACCC CCATCTTGAA GCCATAATCG CTCTCAGACC CGATCTGGTG
ATCACCTTTC CCGGTCATCA AACCTTCACA CCAAGACTGG AGCAACTCGG CATTTCTACC
TTGCAAGTAC AACATCAAAA GCTGAAGGAT ATTCTGGACT CTATCCGTAT TATCGGAATG
GCAACAGGCA AAGAGGCAGA AGCGAAGACT TTACTAGCTA GTCTCAAATC GCGGATGGAA
GCTATAAGGA CTAAAACAGC CCATTTACCC CGGCCACGGG TCCTGGTAGT CATGGGCCAC
CCGGTAAGCC CCCTAAGAGA AATTTTTGTG GCAGGGGCAG CAGACCCCTA TGATGAGATG
ATTCGCATTG CAGGTGGGAT TAACGCTTAT CAAGGACATC TTATCCGGGT ACCCCCCCTC
TCTGCCGAGG GCATTATGCA CCTTGACCCC GAGGTGATCA TTGAGCTGAT ATCTGAGCAA
ACGGCGCCCC AGGATTTGGA CGATACGGCC CTTTTACAGG ATTGGGCCAG ACTGTCCACC
GTAGCCGCTG TAAAAACCGG CCGCATCCAT TTCTTTGCAG ATGATTTTGA TACCGTACCC
GGCCCTCGTT TTATCCGTAC CCTAGAAAAA ATGGCCCGAG CCATTCACCC GGAACTCCAA
TGGGCTAAGC CATGA
 
Protein sequence
MKKIALWALF ILGGITGAHG NESKYLENNR KVKPEPEKYH RIISLAPSIT ETLFALGLEE 
QVVGVTRYCD YPPKALTKPK VGGYLDPHLE AIIALRPDLV ITFPGHQTFT PRLEQLGIST
LQVQHQKLKD ILDSIRIIGM ATGKEAEAKT LLASLKSRME AIRTKTAHLP RPRVLVVMGH
PVSPLREIFV AGAADPYDEM IRIAGGINAY QGHLIRVPPL SAEGIMHLDP EVIIELISEQ
TAPQDLDDTA LLQDWARLST VAAVKTGRIH FFADDFDTVP GPRFIRTLEK MARAIHPELQ
WAKP