Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0840 |
Symbol | |
ID | 3707145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 917377 |
End bp | 918291 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737342 |
Product | periplasmic binding protein |
Protein accession | YP_342883 |
Protein GI | 77164358 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.62088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TAGCACTATG GGCTTTATTC ATTCTGGGGG GTATTACGGG TGCTCATGGC AATGAATCTA AATATTTAGA AAATAATAGA AAAGTTAAGC CTGAGCCGGA AAAATATCAT CGCATTATCT CCCTTGCGCC CAGCATTACG GAAACTTTGT TTGCGTTAGG GCTGGAAGAG CAAGTGGTGG GGGTCACCCG CTACTGCGAT TATCCACCAA AAGCGCTGAC AAAACCAAAG GTAGGCGGAT ACTTGGACCC CCATCTTGAA GCCATAATCG CTCTCAGACC CGATCTGGTG ATCACCTTTC CCGGTCATCA AACCTTCACA CCAAGACTGG AGCAACTCGG CATTTCTACC TTGCAAGTAC AACATCAAAA GCTGAAGGAT ATTCTGGACT CTATCCGTAT TATCGGAATG GCAACAGGCA AAGAGGCAGA AGCGAAGACT TTACTAGCTA GTCTCAAATC GCGGATGGAA GCTATAAGGA CTAAAACAGC CCATTTACCC CGGCCACGGG TCCTGGTAGT CATGGGCCAC CCGGTAAGCC CCCTAAGAGA AATTTTTGTG GCAGGGGCAG CAGACCCCTA TGATGAGATG ATTCGCATTG CAGGTGGGAT TAACGCTTAT CAAGGACATC TTATCCGGGT ACCCCCCCTC TCTGCCGAGG GCATTATGCA CCTTGACCCC GAGGTGATCA TTGAGCTGAT ATCTGAGCAA ACGGCGCCCC AGGATTTGGA CGATACGGCC CTTTTACAGG ATTGGGCCAG ACTGTCCACC GTAGCCGCTG TAAAAACCGG CCGCATCCAT TTCTTTGCAG ATGATTTTGA TACCGTACCC GGCCCTCGTT TTATCCGTAC CCTAGAAAAA ATGGCCCGAG CCATTCACCC GGAACTCCAA TGGGCTAAGC CATGA
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Protein sequence | MKKIALWALF ILGGITGAHG NESKYLENNR KVKPEPEKYH RIISLAPSIT ETLFALGLEE QVVGVTRYCD YPPKALTKPK VGGYLDPHLE AIIALRPDLV ITFPGHQTFT PRLEQLGIST LQVQHQKLKD ILDSIRIIGM ATGKEAEAKT LLASLKSRME AIRTKTAHLP RPRVLVVMGH PVSPLREIFV AGAADPYDEM IRIAGGINAY QGHLIRVPPL SAEGIMHLDP EVIIELISEQ TAPQDLDDTA LLQDWARLST VAAVKTGRIH FFADDFDTVP GPRFIRTLEK MARAIHPELQ WAKP
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