| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0827 |
|---|
| Symbol | |
|---|
| ID | 3707112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 901787 |
|---|
| End bp | 903091 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637737329 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_342870 |
|---|
| Protein GI | 77164345 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAG GTGGACAACG CTCCCTGCCC CGGCCAGTCT ATATTGTCGA TGGTGCTCGG
ACTCCCTTCC TTAAAGCCCG GGGGAAACCC GGTCCCTTCA CCGCAACTGA CCTAGCAGTC
GCTGCGGGCC GTCCATTACT CGCCCGCCAG CCCTTTGAGC CCGAGATGTT GAGCGAGGTT
ATCCTAGGTT GCGTCATGCC CGGTCCAGAT GAGGCCAACA TTGCCCGGGT GGCCGCCTTA
CGCCTAGGTA TTCAGGATCA TATCCCCGCC TGGACCGTGC AACGCAATTG CGCCTCGGGC
ATGCAGGCAC TCGATTGCGC GGCCCTGGAC ATCGCCAATG ATCGTGCGAG CCTGGTATTG
GCTGGCGGGG TAGAAGCCAT GAGCCACGCG CCGGTACTGC TAAGCCGGCC CTTAGTGGAT
TGGCTAGGGG ATTGGAACCA GGCCCGTAAT ATTAAATCGC GTTTACGCTT ACTGGGGCGT
TTACGTCCCT ACCATCTGCG TCCTATTATC GGCCTATTAC GGGGCTTGAC GGATCCCGTG
GTGGGACTTT CTATGGGACA AACGGCGGAA ATCCTTGCCA GCCGCTTCGC CATCGACCGC
CAGGCCATGG ATACTTATGC ACTTGAAAGC CACCAGCGCT TGGCTCACGC TCAGGACAGT
GGCTGGCTAA ACGAAGTGAT CCCGATGTTC GCCGCTAATG GTCAGTTCTT TGAACAGGAT
GACGGGCTAC GCCGGGACAC TTCAATAGCC CAGCTTAATA AGCTCAAACC GGTTTTTGAC
CGTCCCTACG GCTTGGTGAC TGCTGGCAAT AGTGCTCAAG TCACAGACGG TGCTTGTTGG
CTACTATTGG CTTCAGAGCA AGCGGTTACC CAGCACCAAC TTCCGGTAAT AGGGCGCATT
GTAGATAGCC AATGGGCTGC CTTAGATCCC GCCCAGATGG GACTAGGGCC CGTGCATGCC
ACAACCCCGT TGCTGCAACG CCACCAACTC AGCCTCAATG ACCTGGATGC CTGGGAATTG
AACGAAGCCT TTGCTACCCA GGTTTTGGCC TGTTTGGCGG CTTGGCAAGA TTCAGGCTAC
TGCCGCGATG AACTTGGTTT GAAAGAAACC TTCGGCGAAT TGGATCGAAA ACGGCTCAAT
GTGGATGGAG GGGCTGTTGC TCTAGGCCAT CCAGTCGGTG CTAGCGGAGC CCGCATTGTA
CTGCACTTGC TGCATGTCTT GAAACGCTTA AACGGCCAAC GCGGTATCGC CACTATTTGC
ATTGGTGGAG GTCAAGGTGG TGCTATGTTA CTAGAAAGGG GGTAA
|
|---|
| Protein sequence | MEQGGQRSLP RPVYIVDGAR TPFLKARGKP GPFTATDLAV AAGRPLLARQ PFEPEMLSEV
ILGCVMPGPD EANIARVAAL RLGIQDHIPA WTVQRNCASG MQALDCAALD IANDRASLVL
AGGVEAMSHA PVLLSRPLVD WLGDWNQARN IKSRLRLLGR LRPYHLRPII GLLRGLTDPV
VGLSMGQTAE ILASRFAIDR QAMDTYALES HQRLAHAQDS GWLNEVIPMF AANGQFFEQD
DGLRRDTSIA QLNKLKPVFD RPYGLVTAGN SAQVTDGACW LLLASEQAVT QHQLPVIGRI
VDSQWAALDP AQMGLGPVHA TTPLLQRHQL SLNDLDAWEL NEAFATQVLA CLAAWQDSGY
CRDELGLKET FGELDRKRLN VDGGAVALGH PVGASGARIV LHLLHVLKRL NGQRGIATIC
IGGGQGGAML LERG
|
|---|
| |