| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0826 |
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| Symbol | |
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| ID | 3707111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 899764 |
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| End bp | 901782 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737328 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_342869 |
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| Protein GI | 77164344 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA ATACCGATTG GTGCGCCGAG AAAGATACCG ATGACATTGT CTGGCTACGC
CTTAATCAAA GCGGAAAAAA TACCAATGTA TTGTCCAAAT CCGTACTAGA AGCACTAGAT
AAGCAATTAG TCCAATTAGC TACAGAGAAT CCCAAGGGCC TCATCATCCT TTCCGATAAG
AAGCAAGGTT TTATTGCCGG AGCAGATGTC ACTGAATTTA CCGCGCTTCG TAAAGCAACC
GAAGCCCGAA CATGGATTCA GCGGGTCCAT GAAATCTTTA ACCGCTTGGC TAATCTTCCT
TTTCCCACTG TTGCCGTTAT CCATGGCTAT TGTCTCGGCG GCGGGCTAGA ACTGGCCCTT
GCTTGCCGCT ACCGAGTAGC GGCAAATAAC CCTGAGACTC AACTCGGGCT ACCCGAGGTC
AAGCTTGGAA TCCATCCCGG TTATGGCGGT ACCGTACGCC TACCCCGCCT CATCGGTACC
CTTCCCGCTC TTGAGATGAT GCTGAATGGG CGCAGCCTCA GCACCCGTGC CGCAGTACGT
CTGGGATTGA TTGATCAAGC CGTCCCCGCT CGTCACCTTC AGCAGGCCGC CCGCGCCTTT
ATAAAGAAAT CGCCCCCTCC CTACCGTCCT CCTTTCTGGC AACGACTGAT AGGGCAGGCG
CCAATGCGGC AGCTCGTCAC CAAAGTATTA CGCTCCCGAC TTGAAAAACG GGTCAACTCA
AGGCACTATC CTGCCCCTTT TGCTTTATTG GAGCTATGGG AAAAGCAAGA AGGCACCATC
GAGCAGCGCC TGGCACTCGA GGCCGAATCC CTTGCCGCCC TTCTCATCAG CGAAACAACC
AACAACCTCA TTCGGGTTTT TCTGCTTCAA CAACGGCTCA AATCCCTGGG AAAACAGGGT
ATCTTTAAGC CTCAACGGGT TCATGTGATA GGGGCTGGCA CTATGGGGGG AGATATCGCC
GCGTGGTGCG CCCTAAAAAA CCTTCATGTC AGCCTTCAGG ATCAATCCCC CGACCGTATT
GCTCCAGCCA TTAAGCGGGC CCATGGATTA TTCAAGAAAC GCCTCAAAAG CCAGCGTCCA
ATCCAGGCGG CCATGGATCG GCTAATGCCC GACCCGAGGG GGGAGGGACT CGCTAAAGCC
GATGTATTGA TTGAAGCTAT CTTCGAAAAT ATAGAAGCTA AGCAATCCTT GTTTCAGGCC
ATCGAACCTA GGCTAAAAGC GGGGGCTTTG CTGGCCACCA ACACTTCCAG TATTCCCTTA
GAAACTTTGG CTGAAAGCTT GTCTCAATCA GAACGCTTGG TAGGGCTTCA TTTCTTTAAT
CCCGTTGCCA AAATGCAGTT GGTCGAAATA GTGAAAGGAG AAGCAACGAA AGCCGAAGAG
ATGGCGCGAG CTGCAGCTTT TACCCGCCAG ATTGGCCGTC TCCCCCTGCC GGTAAAAAGT
CTGCCGGGGT TTTTGGTTAA TCGTGTGCTT ACCCCCTACC TCCTAGAAGC AACGCGGCTA
CTCAGTGAAG GCGTTCCTGG CCCAGTTATC GATCAGGCTG CTATCGATTT TGGCATGCCC
ATGGGCCCCA TCGAACTGGC AGATACGGTG GGTCTTGATA TCTGCCTCTC GGTGGCTGAA
AGATTAACTC CCCCAGAGCA AATACCCGAA GAGCTGAAAA TCAAAATTCA ACAAGGGCAA
CTTGGCAAAA AAAGCGGGAG CGGATTTTAC AGATACCAAG GAGGAAAATC GGTAAAATCC
CAACCTCCGC AGGAATACCA AGCTCCTGAA GATCTTACTG ACCGCTTAAT TCTCTCTATG
ATCAACGAAG CTGTCTCCTC CCTCCATGAC CGGGTTGTGG AAGATGCCGA TTTGCTCGAC
GCAGGCATGA TCTTTGGCAT TGGTTTTGCC CCCTTCCGGG GAGGTCCCCT CCATTATGTC
CGTACTCAGG GAGTAGATAC AATGCGGCAA CGGCTACAAG CATTGGAAAC CAGATATGGT
ACTCGTTTTA CCCCTAGTGC AGGATGGCAG GCGTTATAA
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| Protein sequence | MNNNTDWCAE KDTDDIVWLR LNQSGKNTNV LSKSVLEALD KQLVQLATEN PKGLIILSDK
KQGFIAGADV TEFTALRKAT EARTWIQRVH EIFNRLANLP FPTVAVIHGY CLGGGLELAL
ACRYRVAANN PETQLGLPEV KLGIHPGYGG TVRLPRLIGT LPALEMMLNG RSLSTRAAVR
LGLIDQAVPA RHLQQAARAF IKKSPPPYRP PFWQRLIGQA PMRQLVTKVL RSRLEKRVNS
RHYPAPFALL ELWEKQEGTI EQRLALEAES LAALLISETT NNLIRVFLLQ QRLKSLGKQG
IFKPQRVHVI GAGTMGGDIA AWCALKNLHV SLQDQSPDRI APAIKRAHGL FKKRLKSQRP
IQAAMDRLMP DPRGEGLAKA DVLIEAIFEN IEAKQSLFQA IEPRLKAGAL LATNTSSIPL
ETLAESLSQS ERLVGLHFFN PVAKMQLVEI VKGEATKAEE MARAAAFTRQ IGRLPLPVKS
LPGFLVNRVL TPYLLEATRL LSEGVPGPVI DQAAIDFGMP MGPIELADTV GLDICLSVAE
RLTPPEQIPE ELKIKIQQGQ LGKKSGSGFY RYQGGKSVKS QPPQEYQAPE DLTDRLILSM
INEAVSSLHD RVVEDADLLD AGMIFGIGFA PFRGGPLHYV RTQGVDTMRQ RLQALETRYG
TRFTPSAGWQ AL
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